Hba_14997 (Heterorhabditis bacteriophora)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Hba_14997 T029364_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bed-3
M00587_2.00 		Caenorhabditis elegans
TCGRGANY
RNTCYCGA		 PBM
Narasimhan et al.(2015)
pTH9056 		0.886 0.886
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hba_14997 BED ZF 93 159

Links

Other BED ZF family TFs
Other Heterorhabditis bacteriophora TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g03085 Acanthocheilonema viteae nAv.1.0.1.g03085 I 0.795
ANCCEY_10600 Ancylostoma ceylanicum ANCCEY_10600 I 0.955
ANCDUO_22610 Ancylostoma duodenale ANCDUO_22610 I 0.757
ASIM_0001651901 Anisakis simplex ASIM_0001651901 I 0.841
ALUE_0002184101 Ascaris lumbricoides ALUE_0002184101 I 0.818
ASU_08993 Ascaris suum ASU_08993 I 0.841
Bm3595 Brugia malayi Bm3595 I 0.795
CBN11928 Caenorhabditis brenneri CBN11928 I 0.886
CBN28223 Caenorhabditis brenneri CBN28223 I 0.886
CBG03458 Caenorhabditis briggsae CBG03458 I 0.886
bed-3 Caenorhabditis elegans WBGene00009133 D 0.886
CJA17936 Caenorhabditis japonica CJA17936 I 0.886
CRE29878 Caenorhabditis remanei CRE29878 I 0.886
CRE01489 Caenorhabditis remanei CRE01489 I 0.886
CGOC_0000021801 Cylicostephanus goldi CGOC_0000021801 I 0.955
nDi.2.2.2.g02831 Dirofilaria immitis nDi.2.2.2.g02831 I 0.795
DME_0000322601 Dracunculus medinensis DME_0000322601 I 0.795
EVEC_0000803501 Enterobius vermicularis EVEC_0000803501 I 0.841
GPLIN_000014500 Globodera pallida GPLIN_000014500 I 0.750
nLs.2.1.2.g03792 Litomosoides sigmodontis nLs.2.1.2.g03792 I 0.795
LOAG_01923 Loa loa LOAG_01923 I 0.795
NECAME_07822 Necator americanus NECAME_07822 I 0.955
OESDEN_02515 Oesophagostomum dentatum OESDEN_02515 I 0.955
nOo.2.0.1.g00032 Onchocerca ochengi nOo.2.0.1.g00032 I 0.795
WBGene00241796 Onchocerca volvulus WBGene00241796 I 0.795
PTRK_0000487800 Parastrongyloides trichosuri PTRK_0000487800 I 0.818
scaffold140-EXSNAP2012.77 Pristionchus exspectatus scaffold140-EXSNAP2012.77 I 0.864
RSKR_0000579600 Rhabditophanes kr3021 RSKR_0000579600 I 0.818
L596_g13737 Steinernema carpocapsae L596_g13737 I 0.841
L889_g10141 Steinernema feltiae L889_g10141 I 0.841
L893_g7390 Steinernema glaseri L893_g7390 I 0.841
L898_g15300 Steinernema monticolum L898_g15300 I 0.841
L892_g25347 Steinernema scapterisci L892_g25347 I 0.841
SPAL_0001677600 Strongyloides papillosus SPAL_0001677600 I 0.818
SSTP_0001230300 Strongyloides stercoralis SSTP_0001230300 I 0.818
SVE_1688100 Strongyloides venezuelensis SVE_1688100 I 0.818
SMUV_0001051801 Syphacia muris SMUV_0001051801 I 0.841
WUBG_08027 Wuchereria bancrofti WUBG_08027 I 0.795