CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI00039700
(
Haemonchus contortus
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
HCOI00039700
T029368_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI00039700.t1
BED ZF
198
237
NPVWPYFDVVDGTARCKQCLYSTKSVFSTNLKVHLRSHHR
HCOI00039700.t1
BED ZF
444
484
HPVWMFFKDLEDRMVGCINCSFRTGSAFSTNLKMHLKAHHK
HCOI00039700.t2
BED ZF
198
237
NPVWPYFDVVDGTARCKQCLYSTKSVFSTNLKVHLRSHHR
HCOI00039700.t2
BED ZF
436
476
HPVWMFFKDLEDRMVGCINCSFRTGSAFSTNLKMHLKAHHK
Links
Other
BED ZF
family TFs
Other
Haemonchus contortus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G33550
Brachypodium distachyon
BRADI1G33550
I
0.000
LPERR02G03850
Leersia perrieri
LPERR02G03850
N
0.000
LPERR06G21240
Leersia perrieri
LPERR06G21240
N
0.000
OBART06G25530
Oryza barthii
OBART06G25530
N
0.000
ORGLA02G0040900
Oryza glaberrima
ORGLA02G0040900
N
0.000
OGLUM02G04330
Oryza glumaepatula
OGLUM02G04330
N
0.000
OGLUM06G26910
Oryza glumaepatula
OGLUM06G26910
N
0.000
OMERI06G25700
Oryza meridionalis
OMERI06G25700
N
0.000
ONIVA02G04420
Oryza nivara
ONIVA02G04420
N
0.000
OPUNC06G23160
Oryza punctata
OPUNC06G23160
N
0.000
ORUFI06G27450
Oryza rufipogon
ORUFI06G27450
N
0.000
OS06G0691100
Oryza sativa
OS06G0691100
N
0.000
Pavir.Db00303
Panicum virgatum
Pavir.Db00303
N
0.000
Sb10g028110
Sorghum bicolor
Sb10g028110
N
0.000
GRMZM2G175543
Zea mays
GRMZM2G175543
N
0.000