CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf08609-augustus-gene-0.4
(
Meloidogyne floridensis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
maker-nMf.1.1.scaf08609-augustus-gene-0.4
T029475_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf08609-augustus-gene-0.4-mRNA-1
BED ZF
2
45
SEVWNHFYMAPNGLSVNCNHCGKFMKRSDSSTKSMWGHLKAFHS
Links
Other
BED ZF
family TFs
Other
Meloidogyne floridensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EmuJ_000926300
Echinococcus multilocularis
EmuJ_000926300
N
ECPE_0000872601
Echinostoma caproni
ECPE_0000872601
N
D915_10153
Fasciola hepatica
D915_10153
N
MCOS_0000987801
Mesocestoides corti
MCOS_0000987801
N
PXEA_0001742801
Protopolystoma xenopodis
PXEA_0001742801
N
SSLN_0000201401
Schistocephalus solidus
SSLN_0000201401
N
SSLN_0001593701
Schistocephalus solidus
SSLN_0001593701
N
SCUD_0001424001
Schistosoma curassoni
SCUD_0001424001
N
SPER_0001993501
Spirometra erinaceieuropaei
SPER_0001993501
N
TRE_0000626601
Trichobilharzia regenti
TRE_0000626601
N