CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g08460
(
Acanthocheilonema viteae
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
nAv.1.0.1.g08460
T029530_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t08460-RA
BED ZF
70
111
HPCWDYMHKSEDLDSMVCRVCTQRIKPIDIQKAMEHFINCHP
nAv.1.0.1.t08460-RA
BED ZF
155
194
HPCWRYFTRNRKSADCRMCGTHVAYACSGNLMRHLRSRHI
Links
Other
BED ZF
family TFs
Other
Acanthocheilonema viteae
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PV07_04238
Cladophialophora immunda
PV07_04238
N
A1O5_07823
Cladophialophora psammophila
A1O5_07823
N
A1O7_05848
Cladophialophora yegresii
A1O7_05848
N
A1O9_03901
Exophiala aquamarina
A1O9_03901
N
PV10_06939
Exophiala mesophila
PV10_06939
N
PV06_01411
Exophiala oligosperma
PV06_01411
N
PV05_04981
Exophiala xenobiotica
PV05_04981
N
Z517_04261
Fonsecaea pedrosoi
Z517_04261
N
Z518_08607
Rhinocladiella mackenziei
Z518_08607
N