ACEP13483 (Atta cephalotes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ACEP13483 T030241_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.840 0.865
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.840 0.865
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.840 0.865
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.840 0.865
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.840 0.865
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.840 0.865
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.840 0.846
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.840 0.846
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.840 0.846
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.840 0.846
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.840 0.846
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.840 0.846
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.840 0.846
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.840 0.846
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.840 0.846
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.840 0.846
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP13483-PA bHLH 104 156

Links

Other bHLH family TFs
Other Atta cephalotes TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000012300 Astyanax mexicanus ENSAMXG00000012300 N
ENSAMXG00000010483 Astyanax mexicanus ENSAMXG00000010483 N
usf1 Danio rerio ENSDARG00000041689 N
ENSGMOG00000013274 Gadus morhua ENSGMOG00000013274 I
ENSGMOG00000010933 Gadus morhua ENSGMOG00000010933 N
ENSGMOG00000009783 Gadus morhua ENSGMOG00000009783 I
usf2 Gasterosteus aculeatus ENSGACG00000002481 N
usf1 Gasterosteus aculeatus ENSGACG00000005115 I
USF2 Gasterosteus aculeatus ENSGACG00000012475 I
USF2 Gorilla gorilla ENSGGOG00000000767 N
GYMLUDRAFT_839581 Gymnopus luxurians GYMLUDRAFT_839581 N
ARNTL Homo sapiens ENSG00000133794 D
USF2 Homo sapiens ENSG00000105698 D
ENSLACG00000001157 Latimeria chalumnae ENSLACG00000001157 I
ENSLOCG00000000641 Lepisosteus oculatus ENSLOCG00000000641 I
augustus_masked-nMf.1.1.scaf28485-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf28485-processed-gene-0.0 N
Mlx Mus musculus ENSMUSG00000017801 D
ENSONIG00000013775 Oreochromis niloticus ENSONIG00000013775 N
usf1 Oryzias latipes ENSORLG00000015402 I
ENSPMAG00000009581 Petromyzon marinus ENSPMAG00000009581 N
ENSPFOG00000005160 Poecilia formosa ENSPFOG00000005160 I
ENSPFOG00000017027 Poecilia formosa ENSPFOG00000017027 I
L889_g9731 Steinernema feltiae L889_g9731 N
usf1 Takifugu rubripes ENSTRUG00000005343 I
usf1 Tetraodon nigroviridis ENSTNIG00000014361 I
XP_002938246 Xenopus tropicalis XP_002938246 N
ENSXMAG00000005137 Xiphophorus maculatus ENSXMAG00000005137 I
ENSXMAG00000006484 Xiphophorus maculatus ENSXMAG00000006484 I