AMTR_s00011p00241810 (Amborella trichopoda)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AMTR_s00011p00241810 T030482_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.888 0.941
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.888 0.902
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.888 0.902
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.888 0.902
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.878 0.843
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.878 0.843
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.878 0.843
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.875 0.922
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.875 0.922
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.875 0.922
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.862 0.863
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.862 0.863
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.855 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM94714 bHLH 248 298

Links

Other bHLH family TFs
Other Amborella trichopoda TFs

857 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M437DRAFT_67933 Aureobasidium melanogenum M437DRAFT_67933 I 0.000
M438DRAFT_155623 Aureobasidium pullulans M438DRAFT_155623 I 0.000
AUEXF2481DRAFT_374368 Aureobasidium subglaciale AUEXF2481DRAFT_374368 I 0.000
COCC4DRAFT_46985 Bipolaris maydis COCC4DRAFT_46985 N 0.000
COCMIDRAFT_8999 Bipolaris oryzae COCMIDRAFT_8999 N 0.000
COCSADRAFT_25239 Bipolaris sorokiniana COCSADRAFT_25239 N 0.000
COCVIDRAFT_37014 Bipolaris victoriae COCVIDRAFT_37014 N 0.000
COCCADRAFT_82274 Bipolaris zeicola COCCADRAFT_82274 N 0.000
CHGG_07364 Chaetomium globosum CHGG_07364 I 0.000
estExt_fgenesh1_pg.C_40234 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40234 N 0.000
DOTSEDRAFT_68376 Dothistroma septosporum DOTSEDRAFT_68376 I 0.000
LEMA_P115290.1 Leptosphaeria maculans LEMA_P115290.1 N 0.000
MPH_08875 Macrophomina phaseolina MPH_08875 N 0.000
MYCTH_2301920 Myceliophthora thermophila MYCTH_2301920 I 0.000
estExt_Genewise1.C_12176 Mycosphaerella fijiensis estExt_Genewise1.C_12176 I 0.000
estExt_fgenesh1_pg.C_chr_10960 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10960 I 0.000
UCRNP2_458 Neofusicoccum parvum UCRNP2_458 N 0.000
PODANS_2_4060 Podospora anserina PODANS_2_4060 I 0.000
MYCFIDRAFT_127068 Pseudocercospora fijiensis MYCFIDRAFT_127068 I 0.000
GMDG_01905 Pseudogymnoascus destructans GMDG_01905 I 0.000
V499_05963 Pseudogymnoascus pannorum V499_05963 I 0.000
PTT_02079 Pyrenophora teres PTT_02079 N 0.000
SETTUDRAFT_174289 Setosphaeria turcica SETTUDRAFT_174289 N 0.000
SEPMUDRAFT_146091 Sphaerulina musiva SEPMUDRAFT_146091 I 0.000
THITE_2108095 Thielavia terrestris THITE_2108095 I 0.000
PV09_00811 Verruconis gallopava PV09_00811 N 0.000
Mycgr3G107320 Zymoseptoria tritici Mycgr3G107320 I 0.000