BIM2 (Arabidopsis thaliana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AT1G69010 T030610_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BIM2
M01701_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8089
(Direct) (Direct)
BIM2
M06727_2.00
Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN

NNNNNNNNNNNVDCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_colamp
(Direct) (Direct)
BIM2
M06728_2.00
Arabidopsis thaliana
CACGTGMBNNNCVYV

BRBGNNNVKCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_col_v3b
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BIM1
M01710_2.00
Arabidopsis thaliana
NCRCGTGNNN

NNNCACGYGN
PBM
Weirauch et al.(2014)
pTH8114
0.894 0.804
BIM1
M06739_2.00
Arabidopsis thaliana
CACGTGAYNHNNNH

DNNNDNRTCACGTG
Dap-seq
OMalley et al.(2016)
BIM1_col_a
0.894 0.804
BIM1
M06740_2.00
Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN

NNNDNDNDNDDRKCACGTGMBN
Dap-seq
OMalley et al.(2016)
BIM1_colamp_a
0.894 0.804
BIM1
M09787_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BIM1_01
0.894 0.804
fgenesh1_pg.scaffold_37000071
M01757_2.00
Physcomitrella patens
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8584
0.861 0.765
SPT
M01709_2.00
Arabidopsis thaliana
NCACGTGSN

NSCACGTGN
PBM
Weirauch et al.(2014)
pTH8111
0.851 0.490
UNE10
M01705_2.00
Arabidopsis thaliana
HCACGTGM

KCACGTGD
PBM
Weirauch et al.(2014)
pTH8112
0.843 0.471
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01701_2.00 bHLH 46 96

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G69010.1 bHLH 46 96

Links

Other bHLH family TFs
Other Arabidopsis thaliana TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000005129 Ailuropoda melanoleuca ENSAMEG00000005129 I
ENSAMEG00000015506 Ailuropoda melanoleuca ENSAMEG00000015506 I
Alligator_sinensis_CCG007971.1 Alligator sinensis Alligator_sinensis_CCG007971.1 I
Alligator_sinensis_CCG012315.1 Alligator sinensis Alligator_sinensis_CCG012315.1 I
ENSAPLG00000003145 Anas platyrhynchos ENSAPLG00000003145 I
SREBF2 Anolis carolinensis ENSACAG00000004146 I
Afo_R007963 Aptenodytes forsteri Afo_R007963 I
ENSAMXG00000008028 Astyanax mexicanus ENSAMXG00000008028 I
ENSAMXG00000009016 Astyanax mexicanus ENSAMXG00000009016 I
ENSBTAP00000018956-D1 Bos grunniens ENSBTAP00000018956-D1 I
SREBF1 Bos taurus ENSBTAG00000007884 I
ENSCJAG00000002378 Callithrix jacchus ENSCJAG00000002378 I
SREBF1 Callithrix jacchus ENSCJAG00000008953 I
Aan_R009070 Calypte anna Aan_R009070 I
Aan_R013218 Calypte anna Aan_R013218 I
SREBF2 Canis familiaris ENSCAFG00000001013 I
SREBF1 Canis familiaris ENSCAFG00000018436 I
SREBF1 Cavia porcellus ENSCPOG00000002439 I
SREBF2 Cavia porcellus ENSCPOG00000013199 I
Cmyd_10007930 Chelonia mydas Cmyd_10007930 I
Cmyd_10008393 Chelonia mydas Cmyd_10008393 I
ENSCSAG00000005734 Chlorocebus sabaeus ENSCSAG00000005734 I
ENSCSAG00000008412 Chlorocebus sabaeus ENSCSAG00000008412 I
srebf2 Danio rerio ENSDARG00000063438 I
srebf1 Danio rerio ENSDARG00000067607 I
SREBF2 Dasypus novemcinctus ENSDNOG00000048031 I
YQE_07365 Dendroctonus ponderosae YQE_07365 I
Srebf2 Dipodomys ordii ENSDORG00000000691 I
Srebf1 Dipodomys ordii ENSDORG00000012333 I
SREBP Drosophila ananassae FBgn0100584 I
SREBP Drosophila erecta FBgn0108291 I
SREBP Drosophila grimshawi FBgn0122129 I
HLH106 Drosophila melanogaster FBgn0261283 D
SREBP Drosophila persimilis FBgn0153336 I
SREBP Drosophila pseudoobscura FBgn0081122 I
SREBP Drosophila sechellia FBgn0174544 I
SREBP Drosophila simulans FBgn0186498 I
SREBP Drosophila virilis FBgn0198580 I
SREBP Drosophila willistoni FBgn0219495 I
SREBP Drosophila yakuba FBgn0236960 I
SREBF2 Echinops telfairi ENSETEG00000000459 I
SREBF1 Echinops telfairi ENSETEG00000004179 I
SREBF1 Equus caballus ENSECAG00000019802 I
SREBF2 Equus caballus ENSECAG00000024608 I
SREBF2 Erinaceus europaeus ENSEEUG00000003437 I
SREBF1 Felis catus ENSFCAG00000001983 I
SREBF2 Felis catus ENSFCAG00000014289 I
ENSFALG00000011811 Ficedula albicollis ENSFALG00000011811 I
ENSFALG00000013762 Ficedula albicollis ENSFALG00000013762 I
ENSGMOG00000006325 Gadus morhua ENSGMOG00000006325 I
ENSGALG00000011916 Gallus gallus ENSGALG00000011916 I
SREBF1 Gallus gallus ENSGALG00000027188 I
srebf2 Gasterosteus aculeatus ENSGACG00000007259 I
srebf1 Gasterosteus aculeatus ENSGACG00000012064 I
Gfo_R004756 Geospiza fortis Gfo_R004756 I
Gfo_R006283 Geospiza fortis Gfo_R006283 I
SREBF1 Gorilla gorilla ENSGGOG00000002713 I
SREBF2 Gorilla gorilla ENSGGOG00000012065 I
HHAL003331-PA Halyomorpha halys HHAL003331-PA I
SREBF1 Homo sapiens ENSG00000072310 D
SREBF2 Homo sapiens ENSG00000198911 D
ENSSTOG00000012916 Ictidomys tridecemlineatus ENSSTOG00000012916 I
ENSSTOG00000014939 Ictidomys tridecemlineatus ENSSTOG00000014939 I
ENSLACG00000013149 Latimeria chalumnae ENSLACG00000013149 I
ENSLOCG00000008766 Lepisosteus oculatus ENSLOCG00000008766 I
ENSLOCG00000011887 Lepisosteus oculatus ENSLOCG00000011887 I
LotgiG224211 Lottia gigantea LotgiG224211 I
SREBF2 Loxodonta africana ENSLAFG00000005791 I
SREBF1 Loxodonta africana ENSLAFG00000021644 I
ENSP00000348069 Macaca fascicularis ENSP00000348069 I
ENSP00000354476 Macaca fascicularis ENSP00000354476 I
SREBF2 Macaca mulatta ENSMMUG00000003357 I
SREBF1 Macaca mulatta ENSMMUG00000023375 I
ENSMEUG00000001306 Macropus eugenii ENSMEUG00000001306 I
ENSMEUG00000011986 Macropus eugenii ENSMEUG00000011986 I
SREBF2 Meleagris gallopavo ENSMGAG00000012074 I
SREBF2 Microcebus murinus ENSMICG00000000913 I
SREBF1 Microcebus murinus ENSMICG00000012535 I
SREBF1 Monodelphis domestica ENSMODG00000014074 I
SREBF2 Monodelphis domestica ENSMODG00000016612 I
ENSMPUG00000000024 Mustela putorius furo ENSMPUG00000000024 I
ENSMPUG00000016372 Mustela putorius furo ENSMPUG00000016372 I
Srebf1 Mus musculus ENSMUSG00000020538 D
Srebf2 Mus musculus ENSMUSG00000022463 D
Myotis_brandtii_SREBF1_10023215 Myotis brandtii Myotis_brandtii_SREBF1_10023215 I
Myotis_brandtii_SREBF2_10014539 Myotis brandtii Myotis_brandtii_SREBF2_10014539 I
SREBF2 Myotis lucifugus ENSMLUG00000002549 I
NV10553 Nasonia vitripennis NV10553 I
ENSNLEG00000013625 Nomascus leucogenys ENSNLEG00000013625 I
SREBF1 Ochotona princeps ENSOPRG00000015069 I
Ogr11708 Ophisaurus gracilis Ogr11708 I
Ogr14454 Ophisaurus gracilis Ogr14454 I
ENSONIG00000002304 Oreochromis niloticus ENSONIG00000002304 I
ENSONIG00000008375 Oreochromis niloticus ENSONIG00000008375 I
SREBF2 Ornithorhynchus anatinus ENSOANG00000002461 I
SREBF1 Ornithorhynchus anatinus ENSOANG00000012278 I
SREBF2 Oryctolagus cuniculus ENSOCUG00000003178 I
srebf1 Oryzias latipes ENSORLG00000009437 I
srebf2 Oryzias latipes ENSORLG00000014672 I
SREBF1 Otolemur garnettii ENSOGAG00000002910 I
SREBF2 Otolemur garnettii ENSOGAG00000014736 I
ENSOARG00000001504 Ovis aries ENSOARG00000001504 I
ENSOARG00000018717 Ovis aries ENSOARG00000018717 I
SREBF2 Pan troglodytes ENSPTRG00000014439 I
ENSPANG00000008691 Papio anubis ENSPANG00000008691 I
ENSPANG00000023675 Papio anubis ENSPANG00000023675 I
ENSPSIG00000014746 Pelodiscus sinensis ENSPSIG00000014746 I
ENSPMAG00000001400 Petromyzon marinus ENSPMAG00000001400 I
ENSPFOG00000000475 Poecilia formosa ENSPFOG00000000475 I
ENSPFOG00000010306 Poecilia formosa ENSPFOG00000010306 I
Pvit_05020 Pogona vitticeps Pvit_05020 I
Pvit_18605 Pogona vitticeps Pvit_18605 I
ENSPPYG00000008037 Pongo abelii ENSPPYG00000008037 I
ENSPPYG00000011880 Pongo abelii ENSPPYG00000011880 I
SREBF2 Procavia capensis ENSPCAG00000006497 I
SREBF1 Procavia capensis ENSPCAG00000014903 I
SREBF2 Pteropus vampyrus ENSPVAG00000001177 I
SREBF1 Pteropus vampyrus ENSPVAG00000005765 I
Srebf1 Rattus norvegicus ENSRNOG00000003463 I
Srebf2 Rattus norvegicus ENSRNOG00000007400 I
RPRC014734 Rhodnius prolixus RPRC014734 I
Sakowv30028178m.g Saccoglossus kowalevskii Sakowv30028178m.g I
ENSSHAG00000011682 Sarcophilus harrisii ENSSHAG00000011682 I
ENSSHAG00000018607 Sarcophilus harrisii ENSSHAG00000018607 I
ENSSARG00000006597 Sorex araneus ENSSARG00000006597 I
ENSSSCG00000023124 Sus scrofa ENSSSCG00000023124 I
SREBF2 Sus scrofa ENSSSCG00000026092 I
SREBF1 Taeniopygia guttata ENSTGUG00000007313 I
ENSTGUG00000009772 Taeniopygia guttata ENSTGUG00000009772 I
srebf2 Takifugu rubripes ENSTRUG00000007413 I
tetur08g03870 Tetranychus urticae tetur08g03870 I
srebf2 Tetraodon nigroviridis ENSTNIG00000010835 I
srebf1 Tetraodon nigroviridis ENSTNIG00000011957 I
TC007163 Tribolium castaneum TC007163 I
SREBF2 Tupaia belangeri ENSTBEG00000016542 I
SREBF2 Tursiops truncatus ENSTTRG00000017350 I
Tal_R010023 Tyto alba Tal_R010023 I
srebf2.L Xenopus laevis XB-GENE-1011364 I
srebf2 Xenopus tropicalis XB-GENE-1011360 I
srebf1 Xenopus tropicalis XB-GENE-987572 I
XP_002944649 Xenopus tropicalis XP_002944649 I
ENSXMAG00000003080 Xiphophorus maculatus ENSXMAG00000003080 I
ENSXMAG00000014774 Xiphophorus maculatus ENSXMAG00000014774 I