CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA020491
(
Oryza indica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
BGIOSGA020491
T030930_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA020491-PA
bHLH
1
50
MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQ
Links
Other
bHLH
family TFs
Other
Oryza indica
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_02125
Aegilops tauschii
F775_02125
N
0.877
F775_03517
Aegilops tauschii
F775_03517
N
0.855
AMTR_s00089p00043950
Amborella trichopoda
AMTR_s00089p00043950
N
0.843
MUTE
Arabidopsis lyrata
scaffold_300691.1
N
0.864
MUTE
Arabidopsis thaliana
AT3G06120
N
0.864
Bostr.2570s0048
Boechera stricta
Bostr.2570s0048
N
0.840
BRADI1G18400
Brachypodium distachyon
BRADI1G18400
N
0.859
BRADI1G71990
Brachypodium distachyon
BRADI1G71990
N
0.855
BRADI2G22810
Brachypodium distachyon
BRADI2G22810
N
0.855
BRADI3G38510
Brachypodium distachyon
BRADI3G38510
N
0.855
BRADI3G58360
Brachypodium distachyon
BRADI3G58360
N
0.855
Bo3g060420
Brassica oleracea
Bo3g060420
N
0.852
Bra001183
Brassica rapa
Bra001183
N
0.852
PK21055.1
Cannabis sativa
PK21055.1
N
0.858
Cagra.1772s0035
Capsella grandiflora
Cagra.1772s0035
N
0.864
Carubv10012751m.g
Capsella rubella
Carubv10012751m.g
N
0.864
evm.TU.supercontig_3.51
Carica papaya
evm.TU.supercontig_3.51
N
0.858
evm.TU.supercontig_57.85
Carica papaya
evm.TU.supercontig_57.85
N
0.858
Ca_00615
Cicer arietinum
Ca_00615
N
0.840
Ca_22410
Cicer arietinum
Ca_22410
N
0.858
Ciclev10005947m.g
Citrus clementina
Ciclev10005947m.g
N
0.840
Ciclev10020360m.g
Citrus clementina
Ciclev10020360m.g
N
0.858
orange1.1g013752m.g
Citrus sinensis
orange1.1g013752m.g
N
0.858
Cucsa.254010
Cucumis sativus
Cucsa.254010
N
0.840
Eucgr.H02788
Eucalyptus grandis
Eucgr.H02788
N
0.858
Eucgr.H03591
Eucalyptus grandis
Eucgr.H03591
N
0.864
Thhalv10022251m.g
Eutrema salsugineum
Thhalv10022251m.g
N
0.864
gene18608-v1.0-hybrid
Fragaria vesca
gene18608-v1.0-hybrid
N
0.858
GLYMA07G05500
Glycine max
GLYMA07G05500
N
0.858
GLYMA13G27880
Glycine max
GLYMA13G27880
N
0.840
GLYMA15G11130
Glycine max
GLYMA15G11130
N
0.840
GLYMA16G02020
Glycine max
GLYMA16G02020
N
0.858
Gorai.003G041800
Gossypium raimondii
Gorai.003G041800
N
0.855
Gorai.006G054300
Gossypium raimondii
Gorai.006G054300
N
0.864
Gorai.007G113200
Gossypium raimondii
Gorai.007G113200
N
0.855
Gorai.007G113300
Gossypium raimondii
Gorai.007G113300
N
0.855
MLOC_57631
Hordeum vulgare
MLOC_57631
N
0.857
MLOC_60291
Hordeum vulgare
MLOC_60291
N
0.855
MLOC_67417
Hordeum vulgare
MLOC_67417
N
0.865
LPERR02G27220
Leersia perrieri
LPERR02G27220
N
0.855
LPERR03G05820
Leersia perrieri
LPERR03G05820
N
0.865
LPERR05G23220
Leersia perrieri
LPERR05G23220
N
0.855
LPERR05G23890
Leersia perrieri
LPERR05G23890
N
0.894
LPERR10G05620
Leersia perrieri
LPERR10G05620
N
0.855
chr3.CM0208.290.nc
Lotus japonicus
chr3.CM0208.290.nc
N
0.858
chr6.CM0139.250.nd
Lotus japonicus
chr6.CM0139.250.nd
N
0.840
MDP0000131133
Malus domestica
MDP0000131133
N
0.846
MDP0000229007
Malus domestica
MDP0000229007
N
0.840
MDP0000321049
Malus domestica
MDP0000321049
N
0.858
MDP0000829998
Malus domestica
MDP0000829998
N
0.858
cassava29786.valid.m1
Manihot esculenta
cassava29786.valid.m1
N
0.858
cassava3377.m1
Manihot esculenta
cassava3377.m1
N
0.840
cassava39415.m1
Manihot esculenta
cassava39415.m1
N
0.858
MTR_2g022280
Medicago truncatula
MTR_2g022280
N
0.840
MTR_8g024210
Medicago truncatula
MTR_8g024210
N
0.858
GSMUA_Achr10G30300_001
Musa acuminata
GSMUA_Achr10G30300_001
N
0.840
GSMUA_Achr5G06780_001
Musa acuminata
GSMUA_Achr5G06780_001
N
0.846
GSMUA_Achr5G17900_001
Musa acuminata
GSMUA_Achr5G17900_001
N
0.840
GSMUA_Achr6G10290_001
Musa acuminata
GSMUA_Achr6G10290_001
N
0.865
GSMUA_Achr7G12790_001
Musa acuminata
GSMUA_Achr7G12790_001
N
0.839
GSMUA_Achr7G21110_001
Musa acuminata
GSMUA_Achr7G21110_001
N
0.864
GSMUA_Achr7G21190_001
Musa acuminata
GSMUA_Achr7G21190_001
N
0.864
OBART03G06470
Oryza barthii
OBART03G06470
N
0.865
OBART05G28280
Oryza barthii
OBART05G28280
N
0.914
OB05G35750
Oryza brachyantha
OB05G35750
N
0.894
ORGLA03G0062600
Oryza glaberrima
ORGLA03G0062600
N
0.865
ORGLA05G0246000
Oryza glaberrima
ORGLA05G0246000
N
0.914
OGLUM03G06480
Oryza glumaepatula
OGLUM03G06480
N
0.865
OGLUM05G29710
Oryza glumaepatula
OGLUM05G29710
N
0.914
BGIOSGA012015
Oryza indica
BGIOSGA012015
N
0.865
OLONG_001045
Oryza longistaminata
OLONG_001045
N
0.865
OLONG_006958
Oryza longistaminata
OLONG_006958
N
0.914
OMERI03G06350
Oryza meridionalis
OMERI03G06350
N
0.865
ONIVA02G06380
Oryza nivara
ONIVA02G06380
N
0.865
ONIVA05G30250
Oryza nivara
ONIVA05G30250
N
0.914
OPUNC05G25820
Oryza punctata
OPUNC05G25820
N
0.914
ORUFI03G06370
Oryza rufipogon
ORUFI03G06370
N
0.865
ORUFI05G30290
Oryza rufipogon
ORUFI05G30290
N
0.914
OS03G0188400
Oryza sativa
OS03G0188400
N
0.865
OS05G0597000
Oryza sativa
OS05G0597000
N
0.914
Pavir.Ea00071
Panicum virgatum
Pavir.Ea00071
N
0.894
Pavir.Fb01393
Panicum virgatum
Pavir.Fb01393
N
0.914
Pavir.J25730
Panicum virgatum
Pavir.J25730
N
0.914
POPTR_0008s20720
Populus trichocarpa
POPTR_0008s20720
N
0.840
Pm002111
Prunus mume
Pm002111
N
0.861
Pm019784
Prunus mume
Pm019784
N
0.846
Pm028748
Prunus mume
Pm028748
N
0.858
PRUPE_ppa006041mg
Prunus persica
PRUPE_ppa006041mg
N
0.858
PRUPE_ppa015055mg
Prunus persica
PRUPE_ppa015055mg
N
0.846
PRUPE_ppa020862mg
Prunus persica
PRUPE_ppa020862mg
N
0.861
29844.m003312
Ricinus communis
29844.m003312
N
0.840
30076.m004456
Ricinus communis
30076.m004456
N
0.858
SapurV1A.0022s0230
Salix purpurea
SapurV1A.0022s0230
N
0.840
SELMODRAFT_410402
Selaginella moellendorffii
SELMODRAFT_410402
N
0.861
SELMODRAFT_451148
Selaginella moellendorffii
SELMODRAFT_451148
N
0.861
Si004438m.g
Setaria italica
Si004438m.g
N
0.894
Si013925m.g
Setaria italica
Si013925m.g
N
0.840
Solyc11g010340.1
Solanum lycopersicum
Solyc11g010340.1
N
0.855
PGSC0003DMG400009101
Solanum tuberosum
PGSC0003DMG400009101
N
0.846
PGSC0003DMG400016145
Solanum tuberosum
PGSC0003DMG400016145
N
0.855
Sb09g030930
Sorghum bicolor
Sb09g030930
N
0.864
TCM_001031
Theobroma cacao
TCM_001031
N
0.855
TCM_005028
Theobroma cacao
TCM_005028
N
0.855
TCM_020520
Theobroma cacao
TCM_020520
N
0.840
Traes_2BS_EE97B0B15
Triticum aestivum
Traes_2BS_EE97B0B15
N
0.877
TRIUR3_09788
Triticum urartu
TRIUR3_09788
N
0.840
MUTE
Vitis vinifera
VIT_05s0020g02700
N
0.840
VIT_07s0191g00240
Vitis vinifera
VIT_07s0191g00240
N
0.868
VIT_15s0048g02510
Vitis vinifera
VIT_15s0048g02510
N
0.858
GRMZM2G417164
Zea mays
GRMZM2G417164
N
0.864