Bra014923 (Brassica rapa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bra014923 T031430_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH104
M01706_2.00 		Arabidopsis thaliana
GGCACGTGCC
GGCACGTGCC		 PBM
Weirauch et al.(2014)
pTH7365 		0.856 0.788
BHLH104
M06737_2.00 		Arabidopsis thaliana
GVCACGTGBMDDBHNSDNBH
DVNHSNDVHHKVCACGTGBC		 Dap-seq
OMalley et al.(2016)
bHLH104_col_b 		0.856 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra014923.1-P bHLH 133 184

Links

Other bHLH family TFs
Other Brassica rapa TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.185__3__AT5G45420.1 Arabidopsis lyrata fgenesh2_kg.185__3__AT5G45420.1 N
AT5G45420 Arabidopsis thaliana AT5G45420 N
Bostr.8819s0063 Boechera stricta Bostr.8819s0063 N
Bo7g072540 Brassica oleracea Bo7g072540 N
Bra025078 Brassica rapa Bra025078 N
Cagra.0493s0019 Capsella grandiflora Cagra.0493s0019 N
Ca_09656 Cicer arietinum Ca_09656 N