Bra034421 (Brassica rapa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bra034421 T031545_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH80
M06722_2.00 		Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH80_col_a 		0.879 0.922
BHLH80
M06723_2.00 		Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH		 Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a 		0.879 0.922
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra034421.1-P bHLH 172 222

Links

Other bHLH family TFs
Other Brassica rapa TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ECANG7_00830 Echinococcus canadensis ECANG7_00830 N
EmuJ_000240200 Echinococcus multilocularis EmuJ_000240200 N
HmN_000166400 Hymenolepis microstoma HmN_000166400 N
SCUD_0000093801 Schistosoma curassoni SCUD_0000093801 N
Smp_034860 Schistosoma mansoni Smp_034860 N
TASK_0000695601 Taenia asiatica TASK_0000695601 N