CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_346996
(
Daphnia pulex
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
DAPPUDRAFT_346996
T032575_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Clk
M05972_2.00
Drosophila melanogaster
MCACGTGV
BCACGTGK
B1H
Zhu et al.(2011)
Clk_cyc_SANGER_5_FBgn0023076
0.880
0.700
Clk
M05973_2.00
Drosophila melanogaster
CACGTGSY
RSCACGTG
B1H
Zhu et al.(2011)
gce_Clk_SANGER_5_FBgn0023076
0.880
0.700
Clk
M05974_2.00
Drosophila melanogaster
CACGTGKM
KACACGTG
B1H
Zhu et al.(2011)
Met_Clk_SANGER_5_FBgn0023076
0.880
0.700
Clk
M05975_2.00
Drosophila melanogaster
SACACGTGY
RCACGTGTS
B1H
Zhu et al.(2011)
tai_Clk_SANGER_5_FBgn0023076
0.880
0.700
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX79971
bHLH
43
92
KRKSRNLSEKKRRDQFNILINELCSMVCTGKRKMDKSTILKSAISFIRNH
Links
Other
bHLH
family TFs
Other
Daphnia pulex
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GB48028
Apis mellifera
GB48028
I
0.852
ACEP20954
Atta cephalotes
ACEP20954
I
0.852
Cflo_02744--XP_394233.3_APIME
Camponotus floridanus
Cflo_02744--XP_394233.3_APIME
I
0.850
CLEC000211
Cimex lectularius
CLEC000211
I
0.914
KGM_10878
Danaus plexippus
KGM_10878
I
0.882
YQE_03736
Dendroctonus ponderosae
YQE_03736
I
0.858
GF24152
Drosophila ananassae
FBgn0101146
I
0.850
GG14938
Drosophila erecta
FBgn0107192
I
0.880
GH16514
Drosophila grimshawi
FBgn0123985
I
0.850
Clk
Drosophila melanogaster
FBgn0023076
D
0.880
GI12195
Drosophila mojavensis
FBgn0134952
I
0.880
GL17825
Drosophila persimilis
FBgn0155428
I
0.880
GA20318
Drosophila pseudoobscura
FBgn0080313
I
0.880
GM24989
Drosophila sechellia
FBgn0179850
I
0.880
GD13034
Drosophila simulans
FBgn0184756
I
0.880
GJ11427
Drosophila virilis
FBgn0198685
I
0.856
GK10694
Drosophila willistoni
FBgn0212707
I
0.880
GE20390
Drosophila yakuba
FBgn0237706
I
0.880
HHAL003628-PA
Halyomorpha halys
HHAL003628-PA
I
0.894
Hsal_05831--XP_394233.3_APIME
Harpegnathos saltator
Hsal_05831--XP_394233.3_APIME
I
0.852
HMEL008784
Heliconius melpomene
HMEL008784
I
0.852
ISCW007040
Ixodes scapularis
ISCW007040
I
0.870
LCUP014936
Lucilia cuprina
LCUP014936
I
0.856
LLOJ006614
Lutzomyia longipalpis
LLOJ006614
I
0.852
MCINX000525
Melitaea cinxia
MCINX000525
I
0.882
NV19013
Nasonia vitripennis
NV19013
I
0.856
PHUM426300
Pediculus humanus
PHUM426300
I
0.894
PPAI002844
Phlebotomus papatasi
PPAI002844
I
0.852
RPRC002110
Rhodnius prolixus
RPRC002110
I
0.894
TC000088
Tribolium castaneum
TC000088
I
0.858