CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

DAPPUDRAFT_99035 *(Daphnia pulex)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	DAPPUDRAFT_99035	T032591_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Fer3 M05993_2.00	Drosophila melanogaster	GKVACAGVTG	CABCTGTBMC	B1H Zhu et al.(2011) Fer3_da_SANGER_5_FBgn0037937	0.890	0.962
FERD3L M04140_2.00	Homo sapiens	GYVACAGCTGKYRC	GYRMCAGCTGTBRC	SELEX Yin et al.(2017) FERD3L_FL_HT-SELEX_1	0.890	0.904
FERD3L M04141_2.00	Homo sapiens	GTRMCAKMTGKYRC	GYRMCAKMTGKYAC	SELEX Yin et al.(2017) FERD3L_FL_HT-SELEX_2	0.890	0.904
FERD3L M04142_2.00	Homo sapiens	GTVACAGCTGKYRC	GYRMCAGCTGTBAC	SELEX Yin et al.(2017) FERD3L_FL_Methyl-HT-SELEX_1	0.890	0.904
FERD3L M04143_2.00	Homo sapiens	GTRMCAKMTGKYRC	GYRMCAKMTGKYAC	SELEX Yin et al.(2017) FERD3L_FL_Methyl-HT-SELEX_2	0.890	0.904
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
EFX85409	bHLH	44	96	QRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYISFMD

Links
Other bHLH family TFs
Other *Daphnia pulex* TFs