ENSAMEG00000015606 (Ailuropoda melanoleuca)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSAMEG00000015606 T032817_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Usf1
M01732_2.00 		Mus musculus
NRYCACGTGNN
NNCACGTGRYN		 PBM
Weirauch et al.(2014)
pTH4376 		0.914 1.000
USF1
M02792_2.00 		Homo sapiens
RNCACGTGRY
RYCACGTGNY		 SELEX
Jolma et al.(2013)
USF1_1 		0.914 1.000
USF1
M04146_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX 		0.914 1.000
USF1
M08056_2.00 		Homo sapiens
RGTCACRTGVB
VBCAYGTGACY		 ChIP-seq
Mathelier et al.(2014)
MA0093.2 		0.914 1.000
USF1
M07807_2.00 		Homo sapiens
VGTCACGTGRBSVVV
BBBSVYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha 		0.914 1.000
USF1
M07808_2.00 		Homo sapiens
VVGTCACGTGVBSVS
SBSVBCACGTGACBB		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha 		0.914 1.000
USF1
M07809_2.00 		Homo sapiens
RGTCACGTGVBSVNN
NNBSVBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha 		0.914 1.000
USF1
M07810_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha 		0.914 1.000
USF1
M07811_2.00 		Homo sapiens
NVGTCACGTGVSSV
BSSBCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha 		0.914 1.000
USF1
M08733_2.00 		Homo sapiens
VGTCACGTGVBS
SVBCACGTGACB		 Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A 		0.914 1.000
Usf1
M08756_2.00 		Mus musculus
NNGTCACGTGVBS
SVBCACGTGACNN		 Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A 		0.914 1.000
USF1
M09460_2.00 		Homo sapiens
YCACGTGRBN
NVYCACGTGR		 Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465 		0.914 1.000
USF1
M09867_2.00 		Homo sapiens
NNRYCACGTGRYNN
NNRYCACGTGRYNN		 Transfac
Matys et al.(2006)
V$USF_01 		0.914 1.000
USF1
M09868_2.00 		Homo sapiens
NNRNCAYRTGNYNN
NNRNCAYRTGNYNN		 Transfac
Matys et al.(2006)
V$USF_02 		0.914 1.000
USF1
M09869_2.00 		Homo sapiens
HCACGTGH
DCACGTGD		 Transfac
Matys et al.(2006)
V$USF_C 		0.914 1.000
USF1
M04147_2.00 		Homo sapiens
VHCAYGTGAYN
NRTCACRTGDB		 SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000016480 bHLH 200 255

Links

Other bHLH family TFs
Other Ailuropoda melanoleuca TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_29935 Aegilops tauschii F775_29935 N
AMTR_s00065p00092420 Amborella trichopoda AMTR_s00065p00092420 N
AMTR_s00048p00216350 Amborella trichopoda AMTR_s00048p00216350 I
Aquca_006_00049 Aquilegia coerulea Aquca_006_00049 N
Aquca_037_00140 Aquilegia coerulea Aquca_037_00140 N
AtGRF3 Arabidopsis lyrata fgenesh2_kg.4__1676__AT2G36400.1 N
GRF3 Arabidopsis thaliana AT2G36400 N
Bostr.23794s0452 Boechera stricta Bostr.23794s0452 N
BRADI1G09900 Brachypodium distachyon BRADI1G09900 N
BRADI1G28400 Brachypodium distachyon BRADI1G28400 N
BRADI2G14320 Brachypodium distachyon BRADI2G14320 N
Bo4g186220 Brassica oleracea Bo4g186220 N
PK18842.1 Cannabis sativa PK18842.1 N
Cagra.0228s0030 Capsella grandiflora Cagra.0228s0030 N
Carubv10025172m.g Capsella rubella Carubv10025172m.g N
evm.TU.supercontig_5.63 Carica papaya evm.TU.supercontig_5.63 N
Ca_00772 Cicer arietinum Ca_00772 N
Cla017990 Citrullus lanatus Cla017990 N
Cla022992 Citrullus lanatus Cla022992 N
Ciclev10011856m.g Citrus clementina Ciclev10011856m.g N
Ciclev10022033m.g Citrus clementina Ciclev10022033m.g I
Cucsa.395430 Cucumis sativus Cucsa.395430 N
Cucsa.378420 Cucumis sativus Cucsa.378420 N
Eucgr.F00097 Eucalyptus grandis Eucgr.F00097 N
Thhalv10016778m.g Eutrema salsugineum Thhalv10016778m.g N
GLYMA03G35010 Glycine max GLYMA03G35010 N
GLYMA04G40880 Glycine max GLYMA04G40880 N
GLYMA06G13960 Glycine max GLYMA06G13960 N
GLYMA19G37740 Glycine max GLYMA19G37740 N
Gorai.004G204600 Gossypium raimondii Gorai.004G204600 I
Gorai.005G098700 Gossypium raimondii Gorai.005G098700 N
Gorai.008G241800 Gossypium raimondii Gorai.008G241800 I
Gorai.009G222200 Gossypium raimondii Gorai.009G222200 N
Gorai.009G277500 Gossypium raimondii Gorai.009G277500 N
Gorai.010G027700 Gossypium raimondii Gorai.010G027700 N
MLOC_70581 Hordeum vulgare MLOC_70581 N
LPERR07G11440 Leersia perrieri LPERR07G11440 N
LPERR03G27480 Leersia perrieri LPERR03G27480 N
cassava30116.valid.m1 Manihot esculenta cassava30116.valid.m1 I
cassava22415.valid.m1 Manihot esculenta cassava22415.valid.m1 N
MTR_7g104050 Medicago truncatula MTR_7g104050 N
mgf001554m Mimulus guttatus mgf001554m N
GSMUA_Achr3G15140_001 Musa acuminata GSMUA_Achr3G15140_001 N
GSMUA_Achr7G27480_001 Musa acuminata GSMUA_Achr7G27480_001 N
GSMUA_Achr8G04970_001 Musa acuminata GSMUA_Achr8G04970_001 N
GSMUA_Achr8G12060_001 Musa acuminata GSMUA_Achr8G12060_001 N
OBART03G32870 Oryza barthii OBART03G32870 N
OB07G19720 Oryza brachyantha OB07G19720 N
ORGLA07G0115500 Oryza glaberrima ORGLA07G0115500 N
ORGLA03G0298100 Oryza glaberrima ORGLA03G0298100 N
OGLUM07G12780 Oryza glumaepatula OGLUM07G12780 N
OGLUM03G32510 Oryza glumaepatula OGLUM03G32510 N
BGIOSGA025662 Oryza indica BGIOSGA025662 N
BGIOSGA013499 Oryza indica BGIOSGA013499 N
OLONG_025015 Oryza longistaminata OLONG_025015 N
OMERI08G17030 Oryza meridionalis OMERI08G17030 N
OMERI07G10850 Oryza meridionalis OMERI07G10850 N
OMERI03G29560 Oryza meridionalis OMERI03G29560 N
ONIVA03G34380 Oryza nivara ONIVA03G34380 N
ONIVA07G11690 Oryza nivara ONIVA07G11690 N
OPUNC07G12320 Oryza punctata OPUNC07G12320 N
OPUNC03G30000 Oryza punctata OPUNC03G30000 N
ORUFI07G13880 Oryza rufipogon ORUFI07G13880 N
ORUFI03G34250 Oryza rufipogon ORUFI03G34250 N
GRF11 Oryza sativa OS07G0467500 N
OS03G0729500 Oryza sativa OS03G0729500 N
Pavir.Ba01449 Panicum virgatum Pavir.Ba01449 N
Pavir.Bb02610 Panicum virgatum Pavir.Bb02610 N
PDK_20s1348362g001 Phoenix dactylifera PDK_20s1348362g001 N
POPTR_0002s11590 Populus trichocarpa POPTR_0002s11590 N
POPTR_0014s01320 Populus trichocarpa POPTR_0014s01320 N
Pm005437 Prunus mume Pm005437 N
PRUPE_ppa019623mg Prunus persica PRUPE_ppa019623mg N
30170.m013673 Ricinus communis 30170.m013673 N
30190.m011066 Ricinus communis 30190.m011066 I
SapurV1A.3102s0020 Salix purpurea SapurV1A.3102s0020 N
SapurV1A.0532s0070 Salix purpurea SapurV1A.0532s0070 N
SapurV1A.0004s0240 Salix purpurea SapurV1A.0004s0240 N
Si030809m.g Setaria italica Si030809m.g N
Solyc04g077510.2 Solanum lycopersicum Solyc04g077510.2 N
PGSC0003DMG400004942 Solanum tuberosum PGSC0003DMG400004942 N
Sb02g032860 Sorghum bicolor Sb02g032860 N
TCM_016120 Theobroma cacao TCM_016120 I
TCM_022490 Theobroma cacao TCM_022490 N
TCM_034655 Theobroma cacao TCM_034655 N
Traes_2AS_CA4D79100 Triticum aestivum Traes_2AS_CA4D79100 N
Traes_2BS_E3CBE0B73 Triticum aestivum Traes_2BS_E3CBE0B73 N
Traes_2DL_243DA9D84 Triticum aestivum Traes_2DL_243DA9D84 N
TRIUR3_26160 Triticum urartu TRIUR3_26160 N
AtGRF7 Vitis vinifera VIT_16s0098g01080 N
VIT_18s0001g08650 Vitis vinifera VIT_18s0001g08650 N
GRMZM2G096709 Zea mays GRMZM2G096709 N
GRMZM2G067743 Zea mays GRMZM2G067743 I
GRMZM2G004619 Zea mays GRMZM2G004619 N