ENSCING00000014406 (Ciona intestinalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCING00000014406 T033283_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.912 0.865
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.912 0.865
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.912 0.865
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.912 0.865
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.912 0.865
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.912 0.865
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.912 0.865
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.912 0.865
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.912 0.865
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.912 0.865
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.912 0.865
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.912 0.865
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.912 0.865
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.912 0.865
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.912 0.865
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.912 0.865
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.912 0.865
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.912 0.865
crp
M03595_2.00 		Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT		 SELEX
Nitta et al.(2015)
crp_1 		0.845 0.750
crp
M05937_2.00 		Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB		 B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994 		0.845 0.750
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000026074 bHLH 98 149

Links

Other bHLH family TFs
Other Ciona intestinalis TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB10138.1 Alternaria brassicicola AB10138.1 N 0.000
e_gw1.00855.137.1 Aspergillus carbonarius e_gw1.00855.137.1 N 0.000
ACLA_098630 Aspergillus clavatus CADACLAG00009192 N 0.000
AFUA_6G01910 Aspergillus fumigatus CADAFUAG00000742 N 0.000
ANIA_08663 Aspergillus nidulans CADANIAG00006382 N 0.000
CADANGAG00010354 Aspergillus niger CADANGAG00010354 N 0.000
CADAORAG00003951 Aspergillus oryzae CADAORAG00003951 N 0.000
EURHEDRAFT_379601 Aspergillus ruber EURHEDRAFT_379601 N 0.000
M437DRAFT_84576 Aureobasidium melanogenum M437DRAFT_84576 N 0.000
M438DRAFT_332367 Aureobasidium pullulans M438DRAFT_332367 N 0.000
AUEXF2481DRAFT_253 Aureobasidium subglaciale AUEXF2481DRAFT_253 N 0.000
BBA_06761 Beauveria bassiana BBA_06761 N 0.000
COCC4DRAFT_55668 Bipolaris maydis COCC4DRAFT_55668 N 0.000
COCMIDRAFT_103010 Bipolaris oryzae COCMIDRAFT_103010 N 0.000
COCSADRAFT_206558 Bipolaris sorokiniana COCSADRAFT_206558 N 0.000
COCVIDRAFT_24205 Bipolaris victoriae COCVIDRAFT_24205 N 0.000
COCCADRAFT_32084 Bipolaris zeicola COCCADRAFT_32084 N 0.000
Bcin09g03260 Botrytis cinerea Bcin09g03260 N 0.000
PVAR5_7539 Byssochlamys spectabilis PVAR5_7539 N 0.000
A1O1_08385 Capronia coronata A1O1_08385 N 0.000
A1O3_03391 Capronia epimyces A1O3_03391 N 0.000
PV04_03664 Capronia semiimmersa PV04_03664 N 0.000
CHGG_06468 Chaetomium globosum CHGG_06468 N 0.000
Z519_02093 Cladophialophora bantiana Z519_02093 N 0.000
G647_04916 Cladophialophora carrionii G647_04916 N 0.000
PV07_06539 Cladophialophora immunda PV07_06539 N 0.000
A1O5_11365 Cladophialophora psammophila A1O5_11365 N 0.000
A1O7_03466 Cladophialophora yegresii A1O7_03466 N 0.000
CPUR_00530 Claviceps purpurea CPUR_00530 N 0.000
estExt_fgenesh1_pg.C_20124 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_20124 N 0.000
CFIO01_13438 Colletotrichum fioriniae CFIO01_13438 N 0.000
CGGC5_4986 Colletotrichum gloeosporioides CGGC5_4986 N 0.000
GLRG_02556 Colletotrichum graminicola GLRG_02556 N 0.000
Cob_05055 Colletotrichum orbiculare Cob_05055 N 0.000
CSUB01_05287 Colletotrichum sublineola CSUB01_05287 N 0.000
W97_05505 Coniosporium apollinis W97_05505 N 0.000
CCM_03290 Cordyceps militaris CCM_03290 N 0.000
EPUS_09223 Endocarpon pusillum EPUS_09223 N 0.000
A1O9_03482 Exophiala aquamarina A1O9_03482 N 0.000
HMPREF1120_05517 Exophiala dermatitidis HMPREF1120_05517 N 0.000
PV10_05569 Exophiala mesophila PV10_05569 N 0.000
PV06_02785 Exophiala oligosperma PV06_02785 N 0.000
PV11_01143 Exophiala sideris PV11_01143 N 0.000
PV08_11181 Exophiala spinifera PV08_11181 N 0.000
PV05_05728 Exophiala xenobiotica PV05_05728 N 0.000
Z517_10262 Fonsecaea pedrosoi Z517_10262 N 0.000
FFUJ_06212 Fusarium fujikuroi FFUJ_06212 N 0.000
FGRRES_13314 Fusarium graminearum FGRRES_13314 N 0.000
FPSE_11722 Fusarium pseudograminearum FPSE_11722 N 0.000
NechaG77847 Fusarium solani NechaG77847 N 0.000
LEMA_P039000.1 Leptosphaeria maculans LEMA_P039000.1 N 0.000
MPH_04625 Macrophomina phaseolina MPH_04625 N 0.000
MGG_02775 Magnaporthe oryzae MGG_02775 N 0.000
MELLADRAFT_93250 Melampsora laricipopulina MELLADRAFT_93250 N 0.000
MAC_00863 Metarhizium acridum MAC_00863 N 0.000
MAM_03278 Metarhizium album MAM_03278 N 0.000
MANI_016888 Metarhizium anisopliae MANI_016888 N 0.000
MBR_08043 Metarhizium brunneum MBR_08043 N 0.000
MGU_03549 Metarhizium guizhouense MGU_03549 N 0.000
MAJ_03920 Metarhizium majus MAJ_03920 N 0.000
X797_006345 Metarhizium robertsii X797_006345 N 0.000
MYCTH_90344 Myceliophthora thermophila MYCTH_90344 N 0.000
fgenesh1_pg.sca_2_chr3_3_0000569 Nectria haematococca fgenesh1_pg.sca_2_chr3_3_0000569 N 0.000
NFIA_048100 Neosartorya fischeri CADNFIAG00005493 N 0.000
NCU10006 Neurospora crassa NCU10006 N 0.000
scaffold_2-snap.172.1 Neurospora discreta scaffold_2-snap.172.1 N 0.000
NEUTE1DRAFT_88983 Neurospora tetrasperma NEUTE1DRAFT_88983 N 0.000
OIDMADRAFT_42045 Oidiodendron maius OIDMADRAFT_42045 N 0.000
F503_01231 Ophiostoma piceae uamh F503_01231 N 0.000
Pc22g24540 Penicillium chrysogenum Pc22g24540 N 0.000
PDIP_61380 Penicillium digitatum PDIP_61380 N 0.000
PEX1_020090 Penicillium expansum PEX1_020090 N 0.000
PITC_054290 Penicillium italicum PITC_054290 N 0.000
PMAA_093360 Penicillium marneffei PMAA_093360 N 0.000
PDE_03324 Penicillium oxalicum PDE_03324 N 0.000
PCH_Pc22g24540 Penicillium rubens PCH_Pc22g24540 N 0.000
PFICI_13983 Pestalotiopsis fici PFICI_13983 N 0.000
SNOG_07349 Phaeosphaeria nodorum SNOG_07349 N 0.000
PredSwiss_ASS2010_346.1 Pneumocystis carinii PredSwiss_ASS2010_346.1 N 0.000
PredSwiss_CON450.1 Pneumocystis carinii PredSwiss_CON450.1 N 0.000
PNEG_00487 Pneumocystis murina PNEG_00487 N 0.000
V499_02325 Pseudogymnoascus pannorum V499_02325 N 0.000
PAN0_014d5008 Pseudozyma antarctica PAN0_014d5008 N 0.000
PSEUBRA_SCAF15g05739 Pseudozyma brasiliensis PSEUBRA_SCAF15g05739 N 0.000
PFL1_04298 Pseudozyma flocculosa PFL1_04298 N 0.000
PHSY_006070 Pseudozyma hubeiensis PHSY_006070 N 0.000
PGTG_01851 Puccinia graminis PGTG_01851 N 0.000
PTTG_01068 Puccinia triticina PTTG_01068 N 0.000
PTT_11110 Pyrenophora teres PTT_11110 N 0.000
Z518_01412 Rhinocladiella mackenziei Z518_01412 N 0.000
SBOR_10021 Sclerotinia borealis SBOR_10021 N 0.000
SS1G_05250 Sclerotinia sclerotiorum SS1G_05250 N 0.000
SETTUDRAFT_36611 Setosphaeria turcica SETTUDRAFT_36611 N 0.000
SMAC_05222 Sordaria macrospora SMAC_05222 N 0.000
sr15751 Sporisorium reilianum sr15751 N 0.000
HMPREF1624_03444 Sporothrix schenckii HMPREF1624_03444 N 0.000
SNOG_07349 Stagonospora nodorum SNOG_07349 N 0.000
PMAA_093360 Talaromyces marneffei PMAA_093360 N 0.000
TSTA_047960 Talaromyces stipitatus TSTA_047960 N 0.000
THITE_2111805 Thielavia terrestris THITE_2111805 N 0.000
VHEMI07809 Torrubiella hemipterigena VHEMI07809 N 0.000
TRIATDRAFT_36070 Trichoderma atroviride TRIATDRAFT_36070 N 0.000
TRIREDRAFT_122541 Trichoderma reesei TRIREDRAFT_122541 N 0.000
TRIVIDRAFT_89428 Trichoderma virens TRIVIDRAFT_89428 N 0.000
GSTUM_00012172001 Tuber melanosporum GSTUM_00012172001 N 0.000
UV8b_1794 Ustilaginoidea virens UV8b_1794 N 0.000
UHOR_07779 Ustilago hordei UHOR_07779 N 0.000
UM04875 Ustilago maydis UM04875 N 0.000
PV09_07684 Verruconis gallopava PV09_07684 N 0.000
VDAG_01773 Verticillium dahliae VDAG_01773 N 0.000