TCF12 (Cavia porcellus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCPOG00000009153 T033419_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.914 1.000
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.914 1.000
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.914 1.000
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.914 1.000
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.914 1.000
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.914 1.000
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.914 1.000
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.914 1.000
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.914 1.000
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.914 1.000
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.914 1.000
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.914 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.914 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.914 0.885
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.912 0.962
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.912 0.962
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.912 0.962
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.912 0.962
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.912 0.962
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.912 0.962
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.912 0.962
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.886 0.962
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.886 0.962
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.886 0.962
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.923
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.923
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.923
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.923
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.923
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.923
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000008217 bHLH 553 606

Links

Other bHLH family TFs
Other Cavia porcellus TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M437DRAFT_14468 Aureobasidium melanogenum M437DRAFT_14468 I
M438DRAFT_31288 Aureobasidium pullulans M438DRAFT_31288 I
BAUCODRAFT_119725 Baudoinia compniacensis BAUCODRAFT_119725 I
BBA_00362 Beauveria bassiana BBA_00362 N
COCC4DRAFT_62452 Bipolaris maydis COCC4DRAFT_62452 I
COCMIDRAFT_23818 Bipolaris oryzae COCMIDRAFT_23818 I
COCSADRAFT_276273 Bipolaris sorokiniana COCSADRAFT_276273 I
COCVIDRAFT_38721 Bipolaris victoriae COCVIDRAFT_38721 I
COCCADRAFT_21472 Bipolaris zeicola COCCADRAFT_21472 I
BDDG_00695 Blastomyces dermatitidis BDDG_00695 I
BGHDH14_bgh02178 Blumeria graminis BGHDH14_bgh02178 I
Bcin01g06300 Botrytis cinerea Bcin01g06300 I
A1O1_00440 Capronia coronata A1O1_00440 I
PV04_01647 Capronia semiimmersa PV04_01647 I
CHGG_05934 Chaetomium globosum CHGG_05934 I
Z519_03111 Cladophialophora bantiana Z519_03111 I
G647_00459 Cladophialophora carrionii G647_00459 I
PV07_10272 Cladophialophora immunda PV07_10272 I
A1O5_03789 Cladophialophora psammophila A1O5_03789 I
A1O7_00422 Cladophialophora yegresii A1O7_00422 I
CPUR_06219 Claviceps purpurea CPUR_06219 N
CIMG_01041 Coccidioides immitis CIMG_01041 I
CPC735_053190 Coccidioides posadasii CPC735_053190 I
estExt_Genewise1Plus.C_100794 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_100794 I
CFIO01_12884 Colletotrichum fioriniae CFIO01_12884 I
CGGC5_6423 Colletotrichum gloeosporioides CGGC5_6423 I
GLRG_04444 Colletotrichum graminicola GLRG_04444 I
CH063_10875 Colletotrichum higginsianum CH063_10875 I
Cob_08038 Colletotrichum orbiculare Cob_08038 I
CSUB01_11791 Colletotrichum sublineola CSUB01_11791 I
estExt_fgenesh1_pg.C_50728 Cryphonectria parasitica estExt_fgenesh1_pg.C_50728 I
HMPREF1541_05909 Cyphellophora europaea HMPREF1541_05909 I
DOTSEDRAFT_74982 Dothistroma septosporum DOTSEDRAFT_74982 I
UCREL1_7924 Eutypa lata UCREL1_7924 I
A1O9_01459 Exophiala aquamarina A1O9_01459 I
HMPREF1120_06024 Exophiala dermatitidis HMPREF1120_06024 I
PV10_06256 Exophiala mesophila PV10_06256 I
PV06_03201 Exophiala oligosperma PV06_03201 I
PV11_07704 Exophiala sideris PV11_07704 I
PV08_05635 Exophiala spinifera PV08_05635 I
PV05_11407 Exophiala xenobiotica PV05_11407 I
Z517_08474 Fonsecaea pedrosoi Z517_08474 I
GGTG_01991 Gaeumannomyces graminis GGTG_01991 I
HCBG_00900 Histoplasma capsulatum HCBG_00900 D
LEMA_P095280.1 Leptosphaeria maculans LEMA_P095280.1 I
MGG_04729 Magnaporthe oryzae MGG_04729 I
MAPG_06349 Magnaporthe poae MAPG_06349 I
MBM_02592 Marssonina brunnea MBM_02592 I
MGU_04950 Metarhizium guizhouense MGU_04950 N
X797_003701 Metarhizium robertsii X797_003701 N
estExt_Genewise1Plus.C_380118 Mycosphaerella fijiensis estExt_Genewise1Plus.C_380118 I
e_gw1.11.537.1 Mycosphaerella graminicola e_gw1.11.537.1 I
OIDMADRAFT_117495 Oidiodendron maius OIDMADRAFT_117495 I
F503_02611 Ophiostoma piceae uamh F503_02611 I
PABG_01647 Paracoccidioides brasiliensis PABG_01647 I
PAAG_01064 Paracoccidioides sp lutzii PAAG_01064 I
PFICI_02022 Pestalotiopsis fici PFICI_02022 I
MYCFIDRAFT_60981 Pseudocercospora fijiensis MYCFIDRAFT_60981 I
GMDG_04728 Pseudogymnoascus destructans GMDG_04728 I
V499_08165 Pseudogymnoascus pannorum V499_08165 I
PTT_18239 Pyrenophora teres PTT_18239 I
Z518_03932 Rhinocladiella mackenziei Z518_03932 I
SAPIO_CDS3166 Scedosporium apiospermum SAPIO_CDS3166 I
SBOR_1325 Sclerotinia borealis SBOR_1325 I
SETTUDRAFT_103803 Setosphaeria turcica SETTUDRAFT_103803 I
SEPMUDRAFT_52418 Sphaerulina musiva SEPMUDRAFT_52418 I
THITE_2112431 Thielavia terrestris THITE_2112431 I
UCRPA7_6713 Togninia minima UCRPA7_6713 I
VHEMI04007 Torrubiella hemipterigena VHEMI04007 N
TRIATDRAFT_297376 Trichoderma atroviride TRIATDRAFT_297376 N
TRIREDRAFT_56863 Trichoderma reesei TRIREDRAFT_56863 N
TRIVIDRAFT_173229 Trichoderma virens TRIVIDRAFT_173229 N
Mycgr3G49965 Zymoseptoria tritici Mycgr3G49965 I