arntl2 (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000041381 T033687_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.839 0.796
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.839 0.796
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.839 0.796
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.839 0.796
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.839 0.796
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.839 0.796
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.839 0.796
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.839 0.796
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.839 0.796
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000134619 bHLH 90 143
ENSDARP00000139384 bHLH 90 143

Links

Other bHLH family TFs
Other Danio rerio TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene31621-v1.0-hybrid Fragaria vesca gene31621-v1.0-hybrid N
Lus10011445.g Linum usitatissimum Lus10011445.g N
Lus10035873.g Linum usitatissimum Lus10035873.g N
Lus10037550.g Linum usitatissimum Lus10037550.g N
MDP0000274723 Malus domestica MDP0000274723 N
cassava20419.m1 Manihot esculenta cassava20419.m1 N
TGA1A Nicotiana sp. TGA1A_TOBAC D
TGA1A_TOBAC Nicotiana tabacum TGA1A_TOBAC D
PRUPE_ppa007578mg Prunus persica PRUPE_ppa007578mg I
29908.m005962 Ricinus communis 29908.m005962 N
SapurV1A.1429s0020 Salix purpurea SapurV1A.1429s0020 N
TCM_001212 Theobroma cacao TCM_001212 N