CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEUROD4
(
Dasypus novemcinctus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSDNOG00000009650
T033766_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.880
0.885
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.880
0.885
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.880
0.885
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.880
0.885
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.880
0.885
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.880
0.885
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.880
0.885
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.880
0.885
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.845
0.865
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.845
0.865
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.845
0.865
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.845
0.865
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.845
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000007470
bHLH
88
140
RRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALS
Links
Other
bHLH
family TFs
Other
Dasypus novemcinctus
TFs
269 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.00118_#_285
Aspergillus carbonarius
fgenesh1_pm.00118_#_285
I
ACLA_083620
Aspergillus clavatus
CADACLAG00007771
I
CADAFLAG00009914
Aspergillus flavus
CADAFLAG00009914
I
AFUA_6G08790
Aspergillus fumigatus
CADAFUAG00001570
I
ANIA_01729
Aspergillus nidulans
CADANIAG00008374
D
CADANGAG00008951
Aspergillus niger
CADANGAG00008951
I
EURHEDRAFT_377589
Aspergillus ruber
EURHEDRAFT_377589
I
ATEG_06629
Aspergillus terreus
CADATEAG00009107
I
NFIA_054440
Neosartorya fischeri
CADNFIAG00005184
I
OIDMADRAFT_106725
Oidiodendron maius
OIDMADRAFT_106725
I
Pc12g08840
Penicillium chrysogenum
Pc12g08840
I
PDIP_36160
Penicillium digitatum
PDIP_36160
I
PEX1_074170
Penicillium expansum
PEX1_074170
I
PITC_096370
Penicillium italicum
PITC_096370
I
PMAA_073600
Penicillium marneffei
PMAA_073600
I
PCH_Pc12g08840
Penicillium rubens
PCH_Pc12g08840
I
U727_0043150051
Penicillium solitum
U727_0043150051
I
S40288_04276
Stachybotrys chartarum
S40288_04276
I
S40285_06305
Stachybotrys chlorohalonata
S40285_06305
I
PMAA_073600
Talaromyces marneffei
PMAA_073600
I
TSTA_094060
Talaromyces stipitatus
TSTA_094060
I
TRIVIDRAFT_55393
Trichoderma virens
TRIVIDRAFT_55393
N