CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGALG00000012235
(
Gallus gallus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSGALG00000012235
T034515_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.894
0.942
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.894
0.942
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.894
0.942
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.894
0.942
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.894
0.942
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.894
0.942
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.894
0.942
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.894
0.942
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.859
0.942
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.859
0.942
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.859
0.942
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.859
0.942
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.859
0.942
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000019951
bHLH
95
147
RRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
Links
Other
bHLH
family TFs
Other
Gallus gallus
TFs
270 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000003228
Ailuropoda melanoleuca
ENSAMEG00000003228
I
ENSAMEG00000008058
Ailuropoda melanoleuca
ENSAMEG00000008058
I
Alligator_sinensis_CCG000741.1
Alligator sinensis
Alligator_sinensis_CCG000741.1
N
ENSAPLG00000016341
Anas platyrhynchos
ENSAPLG00000016341
N
IKZF2
Anolis carolinensis
ENSACAG00000025864
I
Afo_R007273
Aptenodytes forsteri
Afo_R007273
I
ENSAMXG00000012992
Astyanax mexicanus
ENSAMXG00000012992
N
ENSP00000262032-D1
Bos grunniens
ENSP00000262032-D1
I
ENSP00000342876-D1
Bos grunniens
ENSP00000342876-D1
I
IKZF4
Bos taurus
ENSBTAG00000012636
I
Brh_R001017
Buceros rhinoceros
Brh_R001017
I
IKZF4
Callithrix jacchus
ENSCJAG00000006230
I
IKZF2
Callithrix jacchus
ENSCJAG00000011409
I
Aan_R005612
Calypte anna
Aan_R005612
I
Aan_R015421
Calypte anna
Aan_R015421
I
IKZF2
Canis familiaris
ENSCAFG00000014224
I
IKZF4
Canis familiaris
ENSCAFG00000030801
I
IKZF2
Cavia porcellus
ENSCPOG00000013506
I
Cmyd_10003867
Chelonia mydas
Cmyd_10003867
N
Cmyd_10006949
Chelonia mydas
Cmyd_10006949
I
ENSCSAG00000005270
Chlorocebus sabaeus
ENSCSAG00000005270
I
IKZF4
Danio rerio
ENSDARG00000037068
N
IKZF4
Dasypus novemcinctus
ENSDNOG00000037824
I
Ikzf2
Dipodomys ordii
ENSDORG00000007539
I
Ikzf4
Dipodomys ordii
ENSDORG00000015397
I
IKZF4
Echinops telfairi
ENSETEG00000018642
N
IKZF2
Echinops telfairi
ENSETEG00000019814
I
IKZF4
Equus caballus
ENSECAG00000024175
I
IKZF2
Erinaceus europaeus
ENSEEUG00000001089
I
IKZF4
Erinaceus europaeus
ENSEEUG00000006871
I
IKZF2
Felis catus
ENSFCAG00000009654
I
IKZF4
Felis catus
ENSFCAG00000029852
I
ENSFALG00000012948
Ficedula albicollis
ENSFALG00000012948
I
ENSGMOG00000004722
Gadus morhua
ENSGMOG00000004722
N
ENSGMOG00000007568
Gadus morhua
ENSGMOG00000007568
N
IKZF2
Gallus gallus
ENSGALG00000003136
I
IKZF4
Gasterosteus aculeatus
ENSGACG00000000739
N
si:dkey-166n8.9
Gasterosteus aculeatus
ENSGACG00000009112
N
Gfo_R012078
Geospiza fortis
Gfo_R012078
I
IKZF2
Gorilla gorilla
ENSGGOG00000011301
I
IKZF4
Gorilla gorilla
ENSGGOG00000011558
I
IKZF2
Homo sapiens
ENSG00000030419
D
IKZF4
Homo sapiens
ENSG00000123411
I
ENSSTOG00000010547
Ictidomys tridecemlineatus
ENSSTOG00000010547
I
ENSSTOG00000011683
Ictidomys tridecemlineatus
ENSSTOG00000011683
I
IKZF2
Loxodonta africana
ENSLAFG00000008236
I
IKZF4
Loxodonta africana
ENSLAFG00000026742
I
ENSP00000262032
Macaca fascicularis
ENSP00000262032
I
ENSP00000342876
Macaca fascicularis
ENSP00000342876
I
IKZF2
Macaca mulatta
ENSMMUG00000000381
I
IKZF4
Macaca mulatta
ENSMMUG00000007523
I
ENSMEUG00000000683
Macropus eugenii
ENSMEUG00000000683
I
ENSMGAG00000003697
Meleagris gallopavo
ENSMGAG00000003697
I
ENSMGAG00000010066
Meleagris gallopavo
ENSMGAG00000010066
I
IKZF4
Microcebus murinus
ENSMICG00000011029
I
IKZF2
Microcebus murinus
ENSMICG00000013862
I
IKZF4
Monodelphis domestica
ENSMODG00000001780
N
ENSMPUG00000000964
Mustela putorius furo
ENSMPUG00000000964
I
Ikzf4
Mus musculus
ENSMUSG00000002578
I
Ikzf2
Mus musculus
ENSMUSG00000025997
I
Myotis_brandtii_IKZF4_10009162
Myotis brandtii
Myotis_brandtii_IKZF4_10009162
I
IKZF2
Myotis lucifugus
ENSMLUG00000012494
I
IKZF4
Myotis lucifugus
ENSMLUG00000026014
I
ENSNLEG00000007199
Nomascus leucogenys
ENSNLEG00000007199
I
ENSNLEG00000017564
Nomascus leucogenys
ENSNLEG00000017564
I
IKZF4
Ochotona princeps
ENSOPRG00000007904
I
Ogr17485
Ophisaurus gracilis
Ogr17485
N
ENSONIG00000012141
Oreochromis niloticus
ENSONIG00000012141
N
ENSONIG00000019065
Oreochromis niloticus
ENSONIG00000019065
N
IKZF2
Oryctolagus cuniculus
ENSOCUG00000007309
I
IKZF4
Oryctolagus cuniculus
ENSOCUG00000012558
I
IKZF4
Oryzias latipes
ENSORLG00000001555
N
si:dkey-166n8.9
Oryzias latipes
ENSORLG00000007632
N
IKZF2
Otolemur garnettii
ENSOGAG00000016680
I
IKZF4
Otolemur garnettii
ENSOGAG00000034375
I
ENSOARG00000010565
Ovis aries
ENSOARG00000010565
I
ENSOARG00000019252
Ovis aries
ENSOARG00000019252
I
IKZF4
Pan troglodytes
ENSPTRG00000005074
I
IKZF2
Pan troglodytes
ENSPTRG00000012884
I
ENSPANG00000016694
Papio anubis
ENSPANG00000016694
I
ENSPSIG00000003074
Pelodiscus sinensis
ENSPSIG00000003074
N
ENSPSIG00000014940
Pelodiscus sinensis
ENSPSIG00000014940
I
ENSPFOG00000001552
Poecilia formosa
ENSPFOG00000001552
N
ENSPFOG00000023810
Poecilia formosa
ENSPFOG00000023810
N
Pvit_00621
Pogona vitticeps
Pvit_00621
N
Pvit_13083
Pogona vitticeps
Pvit_13083
I
ENSPPYG00000004641
Pongo abelii
ENSPPYG00000004641
I
ENSPPYG00000013139
Pongo abelii
ENSPPYG00000013139
I
IKZF4
Procavia capensis
ENSPCAG00000010641
I
IKZF4
Pteropus vampyrus
ENSPVAG00000007558
I
IKZF2
Pteropus vampyrus
ENSPVAG00000014197
I
Ikzf4
Rattus norvegicus
ENSRNOG00000005535
I
Ikzf2
Rattus norvegicus
ENSRNOG00000027430
I
ENSSHAG00000007337
Sarcophilus harrisii
ENSSHAG00000007337
N
IKZF2
Sus scrofa
ENSSSCG00000016164
I
IKZF2
Taeniopygia guttata
ENSTGUG00000002874
I
si:dkey-166n8.9
Takifugu rubripes
ENSTRUG00000011798
N
IKZF4
Takifugu rubripes
ENSTRUG00000012076
N
ENSTSYG00000006472
Tarsius syrichta
ENSTSYG00000006472
I
IKZF4
Tetraodon nigroviridis
ENSTNIG00000014592
N
IKZF2
Tupaia belangeri
ENSTBEG00000010122
I
Tal_R002368
Tyto alba
Tal_R002368
I
IKZF2
Vicugna pacos
ENSVPAG00000004262
I
ikzf4.S
Xenopus laevis
XB-GENE-1219106
N
ikzf2
Xenopus tropicalis
XB-GENE-1013632
I
ikzf4
Xenopus tropicalis
XB-GENE-1219102
N
ENSXMAG00000011156
Xiphophorus maculatus
ENSXMAG00000011156
N