ENSLOCG00000000641 (Lepisosteus oculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLOCG00000000641 T034982_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Usf1
M01732_2.00 		Mus musculus
NRYCACGTGNN
NNCACGTGRYN		 PBM
Weirauch et al.(2014)
pTH4376 		0.843 0.944
USF1
M02792_2.00 		Homo sapiens
RNCACGTGRY
RYCACGTGNY		 SELEX
Jolma et al.(2013)
USF1_1 		0.843 0.944
USF1
M04146_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX 		0.843 0.944
USF1
M08056_2.00 		Homo sapiens
RGTCACRTGVB
VBCAYGTGACY		 ChIP-seq
Mathelier et al.(2014)
MA0093.2 		0.843 0.944
USF1
M07807_2.00 		Homo sapiens
VGTCACGTGRBSVVV
BBBSVYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha 		0.843 0.944
USF1
M07808_2.00 		Homo sapiens
VVGTCACGTGVBSVS
SBSVBCACGTGACBB		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha 		0.843 0.944
USF1
M07809_2.00 		Homo sapiens
RGTCACGTGVBSVNN
NNBSVBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha 		0.843 0.944
USF1
M07810_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha 		0.843 0.944
USF1
M07811_2.00 		Homo sapiens
NVGTCACGTGVSSV
BSSBCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha 		0.843 0.944
USF1
M08733_2.00 		Homo sapiens
VGTCACGTGVBS
SVBCACGTGACB		 Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A 		0.843 0.944
Usf1
M08756_2.00 		Mus musculus
NNGTCACGTGVBS
SVBCACGTGACNN		 Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A 		0.843 0.944
USF1
M09460_2.00 		Homo sapiens
YCACGTGRBN
NVYCACGTGR		 Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465 		0.843 0.944
USF1
M09867_2.00 		Homo sapiens
NNRYCACGTGRYNN
NNRYCACGTGRYNN		 Transfac
Matys et al.(2006)
V$USF_01 		0.843 0.944
USF1
M09868_2.00 		Homo sapiens
NNRNCAYRTGNYNN
NNRNCAYRTGNYNN		 Transfac
Matys et al.(2006)
V$USF_02 		0.843 0.944
USF1
M09869_2.00 		Homo sapiens
HCACGTGH
DCACGTGD		 Transfac
Matys et al.(2006)
V$USF_C 		0.843 0.944
USF1
M04147_2.00 		Homo sapiens
VHCAYGTGAYN
NRTCACRTGDB		 SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX 		0.843 0.944
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000000713 bHLH 199 254

Links

Other bHLH family TFs
Other Lepisosteus oculatus TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
IKZF1 Callithrix jacchus ENSCJAG00000010988 I
IKZF2 Callithrix jacchus ENSCJAG00000011409 I
IKZF3 Callithrix jacchus ENSCJAG00000008957 I
ENSCSAG00000009405 Chlorocebus sabaeus ENSCSAG00000009405 N
ikzf1 Danio rerio ENSDARG00000013539 I
ENSDORG00000002620 Dipodomys ordii ENSDORG00000002620 N
ENSDORG00000010394 Dipodomys ordii ENSDORG00000010394 N
IKZF1 Echinops telfairi ENSETEG00000011408 N
IKZF2 Equus caballus ENSECAG00000000040 N
IKZF2 Homo sapiens ENSG00000030419 D
IKZF3 Homo sapiens ENSG00000161405 D
IKZF1 Homo sapiens ENSG00000185811 D
IKZF2 Macaca mulatta ENSMMUG00000000381 I
IKZF3 Macaca mulatta ENSMMUG00000017337 I
IKZF1 Macaca mulatta ENSMMUG00000000504 I
ENSMEUG00000014645 Macropus eugenii ENSMEUG00000014645 N
ENSMICG00000002334 Microcebus murinus ENSMICG00000002334 N
Ikzf1 Mus musculus ENSMUSG00000018654 D
Ikzf2 Mus musculus ENSMUSG00000025997 I
Myotis_brandtii_IKZF2_10022929 Myotis brandtii Myotis_brandtii_IKZF2_10022929 N
IKZF3 Oryzias latipes ENSORLG00000002674 I
ikzf1 Oryzias latipes ENSORLG00000020562 N
ENSPSIG00000014940 Pelodiscus sinensis ENSPSIG00000014940 I
Ikzf1 Rattus norvegicus ENSRNOG00000004444 I
IKZF2 Sorex araneus ENSSARG00000012607 N
IKZF1 Sorex araneus ENSSARG00000012665 N
ikzf1 Takifugu rubripes ENSTRUG00000017779 I
ENSTSYG00000007372 Tarsius syrichta ENSTSYG00000007372 N
ikzf1 Xenopus tropicalis XB-GENE-876522 N