CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000016232
(
Lepisosteus oculatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSLOCG00000016232
T035064_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcf21
M01746_2.00
Mus musculus
RMCAKMTGK
MCAKMTGKY
PBM
Weirauch et al.(2014)
pTH5087
0.914
1.000
Tcf21
M02819_2.00
Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB
SELEX
Jolma et al.(2013)
Tcf21_1
0.914
1.000
TCF21
M04092_2.00
Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1
0.914
1.000
TCF21
M04093_2.00
Homo sapiens
NRCCATATGKYV
BRMCATATGGYN
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2
0.914
1.000
TCF21
M04094_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1
0.914
1.000
TCF21
M04095_2.00
Homo sapiens
BACCATATGKYV
BRMCATATGGTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2
0.914
1.000
Msc
M01730_2.00
Mus musculus
NVCRKMYGBN
NVCRKMYGBN
PBM
Weirauch et al.(2014)
pTH5112
0.914
0.981
MSC
M02801_2.00
Homo sapiens
AACAGCTGTT
AACAGCTGTT
SELEX
Jolma et al.(2013)
MSC_1
0.914
0.981
MSC
M04183_2.00
Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1
0.914
0.981
MSC
M04184_2.00
Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2
0.914
0.981
MSC
M04187_2.00
Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1
0.914
0.981
MSC
M04188_2.00
Homo sapiens
BRMCATATGKYN
NRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2
0.914
0.981
MSC
M04185_2.00
Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1
0.914
0.981
MSC
M04186_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2
0.914
0.981
MSC
M04189_2.00
Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1
0.914
0.981
MSC
M04190_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000020013
bHLH
80
132
QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLR
Links
Other
bHLH
family TFs
Other
Lepisosteus oculatus
TFs
184 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_033820
Acremonium chrysogenum
ACRE_033820
I
0.000
BBA_08070
Beauveria bassiana
BBA_08070
I
0.000
CHGG_02757
Chaetomium globosum
CHGG_02757
I
0.000
CPUR_08341
Claviceps purpurea
CPUR_08341
I
0.000
CFIO01_08122
Colletotrichum fioriniae
CFIO01_08122
I
0.000
CGGC5_8345
Colletotrichum gloeosporioides
CGGC5_8345
I
0.000
GLRG_03859
Colletotrichum graminicola
GLRG_03859
I
0.000
CH063_06422
Colletotrichum higginsianum
CH063_06422
I
0.000
Cob_01744
Colletotrichum orbiculare
Cob_01744
I
0.000
e_gw1.4.1107.1
Cryphonectria parasitica
e_gw1.4.1107.1
N
0.000
FFUJ_01489
Fusarium fujikuroi
FFUJ_01489
I
0.000
FGRRES_01293
Fusarium graminearum
FGRRES_01293
I
0.000
FOXG_00092
Fusarium oxysporum
FOXG_00092
I
0.000
FPSE_11604
Fusarium pseudograminearum
FPSE_11604
I
0.000
NechaG31414
Fusarium solani
NechaG31414
I
0.000
FVEG_01423
Fusarium verticillioides
FVEG_01423
I
0.000
GGTG_14005
Gaeumannomyces graminis
GGTG_14005
I
0.000
CMQ_1676
Grosmannia clavigera
CMQ_1676
I
0.000
MGG_16444
Magnaporthe oryzae
MGG_16444
I
0.000
MAPG_06552
Magnaporthe poae
MAPG_06552
I
0.000
MBM_09780
Marssonina brunnea
MBM_09780
I
0.000
MAC_07128
Metarhizium acridum
MAC_07128
I
0.000
MAM_03637
Metarhizium album
MAM_03637
I
0.000
MANI_013516
Metarhizium anisopliae
MANI_013516
I
0.000
MBR_06050
Metarhizium brunneum
MBR_06050
I
0.000
MGU_10384
Metarhizium guizhouense
MGU_10384
I
0.000
MAJ_04538
Metarhizium majus
MAJ_04538
I
0.000
X797_005812
Metarhizium robertsii
X797_005812
I
0.000
MYCTH_2296636
Myceliophthora thermophila
MYCTH_2296636
I
0.000
e_gw1.1.808.1
Nectria haematococca
e_gw1.1.808.1
I
0.000
estExt_fgenesh2_pg.C_20771
Neurospora discreta
estExt_fgenesh2_pg.C_20771
I
0.000
NEUTE1DRAFT_72988
Neurospora tetrasperma
NEUTE1DRAFT_72988
D
0.000
OCS_04027
Ophiocordyceps sinensis
OCS_04027
I
0.000
F503_06980
Ophiostoma piceae uamh
F503_06980
I
0.000
PFICI_01957
Pestalotiopsis fici
PFICI_01957
I
0.000
PODANS_1_13830
Podospora anserina
PODANS_1_13830
I
0.000
SAPIO_CDS6802
Scedosporium apiospermum
SAPIO_CDS6802
I
0.000
SMAC_04265
Sordaria macrospora
SMAC_04265
I
0.000
SPBR_02275
Sporothrix brasiliensis
SPBR_02275
I
0.000
HMPREF1624_02516
Sporothrix schenckii
HMPREF1624_02516
I
0.000
S40285_08198
Stachybotrys chlorohalonata
S40285_08198
I
0.000
THITE_2113102
Thielavia terrestris
THITE_2113102
I
0.000
VHEMI08908
Torrubiella hemipterigena
VHEMI08908
I
0.000
TRIATDRAFT_148646
Trichoderma atroviride
TRIATDRAFT_148646
I
0.000
TRIREDRAFT_57760
Trichoderma reesei
TRIREDRAFT_57760
I
0.000
TRIVIDRAFT_80393
Trichoderma virens
TRIVIDRAFT_80393
I
0.000
VDAG_08832
Verticillium dahliae
VDAG_08832
I
0.000