USF1 (Myotis lucifugus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMLUG00000009179 T035331_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Usf1
M01732_2.00 		Mus musculus
NRYCACGTGNN
NNCACGTGRYN		 PBM
Weirauch et al.(2014)
pTH4376 		0.914 1.000
USF1
M02792_2.00 		Homo sapiens
RNCACGTGRY
RYCACGTGNY		 SELEX
Jolma et al.(2013)
USF1_1 		0.914 1.000
USF1
M04146_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX 		0.914 1.000
USF1
M08056_2.00 		Homo sapiens
RGTCACRTGVB
VBCAYGTGACY		 ChIP-seq
Mathelier et al.(2014)
MA0093.2 		0.914 1.000
USF1
M07807_2.00 		Homo sapiens
VGTCACGTGRBSVVV
BBBSVYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha 		0.914 1.000
USF1
M07808_2.00 		Homo sapiens
VVGTCACGTGVBSVS
SBSVBCACGTGACBB		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha 		0.914 1.000
USF1
M07809_2.00 		Homo sapiens
RGTCACGTGVBSVNN
NNBSVBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha 		0.914 1.000
USF1
M07810_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha 		0.914 1.000
USF1
M07811_2.00 		Homo sapiens
NVGTCACGTGVSSV
BSSBCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha 		0.914 1.000
USF1
M08733_2.00 		Homo sapiens
VGTCACGTGVBS
SVBCACGTGACB		 Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A 		0.914 1.000
Usf1
M08756_2.00 		Mus musculus
NNGTCACGTGVBS
SVBCACGTGACNN		 Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A 		0.914 1.000
USF1
M09460_2.00 		Homo sapiens
YCACGTGRBN
NVYCACGTGR		 Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465 		0.914 1.000
USF1
M09867_2.00 		Homo sapiens
NNRYCACGTGRYNN
NNRYCACGTGRYNN		 Transfac
Matys et al.(2006)
V$USF_01 		0.914 1.000
USF1
M09868_2.00 		Homo sapiens
NNRNCAYRTGNYNN
NNRNCAYRTGNYNN		 Transfac
Matys et al.(2006)
V$USF_02 		0.914 1.000
USF1
M09869_2.00 		Homo sapiens
HCACGTGH
DCACGTGD		 Transfac
Matys et al.(2006)
V$USF_C 		0.914 1.000
USF1
M04147_2.00 		Homo sapiens
VHCAYGTGAYN
NRTCACRTGDB		 SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000008364 bHLH 200 255

Links

Other bHLH family TFs
Other Myotis lucifugus TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_014390 Acremonium chrysogenum ACRE_014390 N
BBA_01626 Beauveria bassiana BBA_01626 N
CPUR_01633 Claviceps purpurea CPUR_01633 N
CFIO01_08383 Colletotrichum fioriniae CFIO01_08383 N
CGGC5_8876 Colletotrichum gloeosporioides CGGC5_8876 N
GLRG_00605 Colletotrichum graminicola GLRG_00605 N
CH063_10454 Colletotrichum higginsianum CH063_10454 N
Cob_13289 Colletotrichum orbiculare Cob_13289 N
CSUB01_06780 Colletotrichum sublineola CSUB01_06780 N
CCM_00106 Cordyceps militaris CCM_00106 N
e_gw1.4.942.1 Cryphonectria parasitica e_gw1.4.942.1 N
FFUJ_00487 Fusarium fujikuroi FFUJ_00487 N
FGRRES_00750 Fusarium graminearum FGRRES_00750 N
FOXG_01081 Fusarium oxysporum FOXG_01081 N
FPSE_01269 Fusarium pseudograminearum FPSE_01269 N
NechaG75378 Fusarium solani NechaG75378 N
FVEG_00433 Fusarium verticillioides FVEG_00433 N
MAC_05157 Metarhizium acridum MAC_05157 N
MAM_06097 Metarhizium album MAM_06097 N
MANI_025150 Metarhizium anisopliae MANI_025150 N
MBR_00240 Metarhizium brunneum MBR_00240 N
MGU_08133 Metarhizium guizhouense MGU_08133 N
MAJ_06003 Metarhizium majus MAJ_06003 N
X797_002594 Metarhizium robertsii X797_002594 N
fgenesh1_pg.sca_1_chr1_3_0000989 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000989 N
OCS_04926 Ophiocordyceps sinensis OCS_04926 N
F503_04232 Ophiostoma piceae uamh F503_04232 N
PFICI_06254 Pestalotiopsis fici PFICI_06254 N
SAPIO_CDS5481 Scedosporium apiospermum SAPIO_CDS5481 N
HMPREF1624_07505 Sporothrix schenckii HMPREF1624_07505 N
UCRPA7_6169 Togninia minima UCRPA7_6169 N
VHEMI05051 Torrubiella hemipterigena VHEMI05051 N
TRIATDRAFT_9815 Trichoderma atroviride TRIATDRAFT_9815 N
TRIREDRAFT_43269 Trichoderma reesei TRIREDRAFT_43269 N
TRIVIDRAFT_19860 Trichoderma virens TRIVIDRAFT_19860 N
VDBG_07369 Verticillium albo atrum VDBG_07369 N
VDBG_07369 Verticillium alfalfae VDBG_07369 N