CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hes1
(
Mus musculus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMUSG00000022528
T035682_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hes1
M01726_2.00
Mus musculus
NVCACGYKNN
NNMRCGTGBN
PBM
Weirauch et al.(2014)
pTH5059
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HES1
M04090_2.00
Homo sapiens
VVCACGYGHM
KDCRCGTGBB
SELEX
Yin et al.(2017)
HES1_eDBD_HT-SELEX
0.914
1.000
HES1
M09822_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q2
0.914
1.000
HES1
M09823_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q3
0.914
1.000
HES1
M09824_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q4
0.914
1.000
HES1
M09825_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q6
0.914
1.000
HES1
M04091_2.00
Homo sapiens
VNYACNYNHN
NDNRNGTRNB
SELEX
Yin et al.(2017)
HES1_eDBD_Methyl-HT-SELEX
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01726_2.00
bHLH
16
73
RKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000023171
bHLH
35
92
RKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ
Links
Other
bHLH
family TFs
Other
Mus musculus
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g00376
Acanthocheilonema viteae
nAv.1.0.1.g00376
N
ANCCAN_24295
Ancylostoma caninum
ANCCAN_24295
N
Afo_R005791
Aptenodytes forsteri
Afo_R005791
N
BTMF_0000932701
Brugia timori
BTMF_0000932701
N
GI15417
Drosophila mojavensis
FBgn0138166
N
GL14745
Drosophila persimilis
FBgn0152349
N
EEL_0001031901
Elaeophora elaphi
EEL_0001031901
N
Gfo_R011132
Geospiza fortis
Gfo_R011132
N
Hba_13069
Heterorhabditis bacteriophora
Hba_13069
N
MESCA000014
Megaselia scalaris
MESCA000014
N
genemark-nMf.1.1.scaf04821-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf04821-processed-gene-0.1
N
OFLC_0001019101
Onchocerca flexuosa
OFLC_0001019101
N
nOo.2.0.1.g10764
Onchocerca ochengi
nOo.2.0.1.g10764
N
PPAI005468
Phlebotomus papatasi
PPAI005468
N
SSLN_0001714501
Schistocephalus solidus
SSLN_0001714501
N
SVUK_0000379901
Strongylus vulgaris
SVUK_0000379901
N
POU4F2
Takifugu rubripes
ENSTRUG00000001400
N
TELCIR_22112
Teladorsagia circumcincta
TELCIR_22112
N