CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYF6
(
Ornithorhynchus anatinus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSOANG00000004854
T035871_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Myf6
M00120_2.00
Mus musculus
NCRNNTGNY
RNCANNYGN
PBM
Badis et al.(2009)
Myf6_3824
0.914
0.981
Myf6
M01742_2.00
Mus musculus
RACAGHTGH
DCADCTGTY
PBM
Weirauch et al.(2014)
pTH5099
0.914
0.981
MYF6
M02780_2.00
Homo sapiens
AACARCTGTY
RACAGYTGTT
SELEX
Jolma et al.(2013)
MYF6_1
0.914
0.981
MYF6
M04084_2.00
Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_1
0.914
0.981
MYF6
M04085_2.00
Homo sapiens
NRACASSTGWYV
BRWCASSTGTYN
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_2
0.914
0.981
MYF6
M05831_2.00
Homo sapiens
BRACAKNTGNY
RNCANMTGTYV
SMiLE-seq
Isakova et al.(2017)
MYF6
0.914
0.981
MYF6
M08717_2.00
Homo sapiens
CASCTGC
GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_HUMAN.H11MO.0.C
0.914
0.981
Myf6
M08767_2.00
Mus musculus
CASCTGC
GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_MOUSE.H11MO.0.C
0.914
0.981
MYF6
M09820_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MRF4_Q3
0.914
0.981
MYF6
M04086_2.00
Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_1
0.914
0.981
MYF6
M04087_2.00
Homo sapiens
BAACASSTGWYV
BRWCASSTGTTV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_2
0.914
0.981
MYOG
M04098_2.00
Homo sapiens
BRACAGCTGWCR
YGWCAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1
0.883
0.865
MYOG
M04099_2.00
Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2
0.883
0.865
MYOG
M04102_2.00
Homo sapiens
NRACARCTGWCR
YGWCAGYTGTYN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1
0.883
0.865
MYOG
M04103_2.00
Homo sapiens
NAACARYTGTYN
NRACARYTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2
0.883
0.865
Myog
M08061_2.00
Mus musculus
RRCAGCTGVNN
NNBCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0500.1
0.883
0.865
MYOG
M08721_2.00
Homo sapiens
BHVCAGCTGYYNB
VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B
0.883
0.865
Myog
M08755_2.00
Mus musculus
BHVCAGCTGYYNB
VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A
0.883
0.865
Myog
M09469_2.00
Mus musculus
RACAGCTG
CAGCTGTY
Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024
0.883
0.865
MYOG
M09829_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01
0.883
0.865
MYOG
M09830_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6
0.883
0.865
MYOG
M04100_2.00
Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1
0.883
0.865
MYOG
M04101_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2
0.883
0.865
MYOG
M04104_2.00
Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1
0.883
0.865
MYOG
M04105_2.00
Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2
0.883
0.865
Myf5
M09463_2.00
Mus musculus
NRRCAGCTGY
RCAGCTGYYN
Misc
Heinz et al.(2010)
GM-Myf5_GSE24852
0.841
0.808
MYF5
M09821_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYF5_Q6
0.841
0.808
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000007696
bHLH
92
143
RRKAATLRERRRLKKINEAFEALKRRTVANPNQRLPKVEILRSAINYIERLQ
Links
Other
bHLH
family TFs
Other
Ornithorhynchus anatinus
TFs
220 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI51366
Acyrthosiphon pisum
ACYPI51366
N
AAEL013882
Aedes aegypti
AAEL013882
N
AALB001249
Anopheles albimanus
AALB001249
N
AATE001792
Anopheles atroparvus
AATE001792
N
ACHR006752
Anopheles christyi
ACHR006752
N
ACOM040797
Anopheles coluzzii
ACOM040797
N
ACUA003717
Anopheles culicifacies
ACUA003717
N
ADIR009746
Anopheles dirus
ADIR009746
N
AFAF006351
Anopheles farauti
AFAF006351
N
AFUN002671
Anopheles funestus
AFUN002671
N
AGAP010355
Anopheles gambiae
AGAP010355
N
AMAM021359
Anopheles maculatus
AMAM021359
N
AMEM013501
Anopheles merus
AMEM013501
N
AMIN006550
Anopheles minimus
AMIN006550
N
ASIS016478
Anopheles sinensis
ASIS016478
N
ASTEI06719
Anopheles stephensi
ASTEI06719
N
GB48690
Apis mellifera
GB48690
N
ACEP27450
Atta cephalotes
ACEP27450
N
BGIBMGA008943
Bombyx mori
BGIBMGA008943
N
Cflo_10152--XP_396406.3_APIME
Camponotus floridanus
Cflo_10152--XP_396406.3_APIME
N
CLEC011477
Cimex lectularius
CLEC011477
N
CpipJ_CPIJ006499
Culex pipiens
CpipJ_CPIJ006499
N
CPIJ006499
Culex quinquefasciatus
CPIJ006499
N
DAPPUDRAFT_314624
Daphnia pulex
DAPPUDRAFT_314624
N
YQE_12022
Dendroctonus ponderosae
YQE_12022
N
GF11509
Drosophila ananassae
FBgn0088549
N
GG19859
Drosophila erecta
FBgn0112060
N
GH23133
Drosophila grimshawi
FBgn0130590
N
lov
Drosophila melanogaster
FBgn0266129
N
GI18474
Drosophila mojavensis
FBgn0141213
N
GA30490
Drosophila pseudoobscura
FBgn0265027
N
GM11763
Drosophila sechellia
FBgn0166706
N
GD24896
Drosophila simulans
FBgn0196212
N
GJ21336
Drosophila virilis
FBgn0208466
N
GK21725
Drosophila willistoni
FBgn0223710
N
GE11385
Drosophila yakuba
FBgn0229197
N
HHAL008062-PA
Halyomorpha halys
HHAL008062-PA
N
Hsal_08940--XP_396406.3_APIME
Harpegnathos saltator
Hsal_08940--XP_396406.3_APIME
N
LDEC009669
Leptinotarsa decemlineata
LDEC009669
N
LCUP011793
Lucilia cuprina
LCUP011793
N
LLOJ008249
Lutzomyia longipalpis
LLOJ008249
N
MESCA004127
Megaselia scalaris
MESCA004127
N
MCINX004651
Melitaea cinxia
MCINX004651
N
MDOA009101
Musca domestica
MDOA009101
N
NV13136
Nasonia vitripennis
NV13136
N
PHUM125110
Pediculus humanus
PHUM125110
N
PPAI000658
Phlebotomus papatasi
PPAI000658
N
RPRC008982
Rhodnius prolixus
RPRC008982
N
SINV21728
Solenopsis invicta
SINV21728
N
TC006481
Tribolium castaneum
TC006481
N
L798_10941
Zootermopsis nevadensis
L798_10941
N