CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCF21
(
Ornithorhynchus anatinus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSOANG00000013098
T035898_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcf21
M01746_2.00
Mus musculus
RMCAKMTGK
MCAKMTGKY
PBM
Weirauch et al.(2014)
pTH5087
0.914
1.000
Tcf21
M02819_2.00
Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB
SELEX
Jolma et al.(2013)
Tcf21_1
0.914
1.000
TCF21
M04092_2.00
Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1
0.914
1.000
TCF21
M04093_2.00
Homo sapiens
NRCCATATGKYV
BRMCATATGGYN
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2
0.914
1.000
TCF21
M04094_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1
0.914
1.000
TCF21
M04095_2.00
Homo sapiens
BACCATATGKYV
BRMCATATGGTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2
0.914
1.000
Msc
M01730_2.00
Mus musculus
NVCRKMYGBN
NVCRKMYGBN
PBM
Weirauch et al.(2014)
pTH5112
0.914
0.981
MSC
M02801_2.00
Homo sapiens
AACAGCTGTT
AACAGCTGTT
SELEX
Jolma et al.(2013)
MSC_1
0.914
0.981
MSC
M04183_2.00
Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1
0.914
0.981
MSC
M04184_2.00
Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2
0.914
0.981
MSC
M04187_2.00
Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1
0.914
0.981
MSC
M04188_2.00
Homo sapiens
BRMCATATGKYN
NRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2
0.914
0.981
MSC
M04185_2.00
Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1
0.914
0.981
MSC
M04186_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2
0.914
0.981
MSC
M04189_2.00
Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1
0.914
0.981
MSC
M04190_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000020701
bHLH
79
131
QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLR
Links
Other
bHLH
family TFs
Other
Ornithorhynchus anatinus
TFs
184 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000019617
Ailuropoda melanoleuca
ENSAMEG00000019617
N
0.000
TIGD7
Bos taurus
ENSBTAG00000020209
N
0.000
TIGD7
Callithrix jacchus
ENSCJAG00000019621
N
0.000
TIGD7
Canis familiaris
ENSCAFG00000032077
N
0.000
TIGD7
Equus caballus
ENSECAG00000004461
N
0.000
TIGD7
Gorilla gorilla
ENSGGOG00000010475
N
0.000
TIGD7
Homo sapiens
ENSG00000140993
N
0.000
ENSSTOG00000013125
Ictidomys tridecemlineatus
ENSSTOG00000013125
N
0.000
ENSP00000268674
Macaca fascicularis
ENSP00000268674
N
0.000
TIGD7
Monodelphis domestica
ENSMODG00000016431
N
0.000
ENSMPUG00000020053
Mustela putorius furo
ENSMPUG00000020053
N
0.000
ENSNLEG00000018448
Nomascus leucogenys
ENSNLEG00000018448
N
0.000
TIGD7
Otolemur garnettii
ENSOGAG00000015891
N
0.000
ENSOARG00000001631
Ovis aries
ENSOARG00000001631
N
0.000
TIGD7
Pan troglodytes
ENSPTRG00000007693
N
0.000
ENSPPYG00000007039
Pongo abelii
ENSPPYG00000007039
N
0.000
TIGD7
Procavia capensis
ENSPCAG00000003971
N
0.000
TIGD7
Pteropus vampyrus
ENSPVAG00000001370
N
0.000
ENSSHAG00000016162
Sarcophilus harrisii
ENSSHAG00000016162
N
0.000
TIGD7
Sorex araneus
ENSSARG00000000233
N
0.000
ENSSSCG00000026262
Sus scrofa
ENSSSCG00000026262
N
0.000