CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NPAS2
(
Oryctolagus cuniculus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSOCUG00000002384
T036010_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Npas2
M01731_2.00
Mus musculus
NVCACGTGBN
NVCACGTGBN
PBM
Weirauch et al.(2014)
pTH5457
0.914
1.000
NPAS2
M04158_2.00
Homo sapiens
NRCACGTGKH
DMCACGTGYN
SELEX
Yin et al.(2017)
NPAS2_eDBD_HT-SELEX
0.914
1.000
Npas2
M09468_2.00
Mus musculus
VKCACRTGKM
KMCAYGTGMB
Misc
Heinz et al.(2010)
Liver-NPAS2_GSE39860
0.914
1.000
NPAS2
M04159_2.00
Homo sapiens
DVCRCRTGKH
DMCAYGYGBH
SELEX
Yin et al.(2017)
NPAS2_eDBD_Methyl-HT-SELEX
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000016233
bHLH
10
59
KRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKH
Links
Other
bHLH
family TFs
Other
Oryctolagus cuniculus
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_062880
Acremonium chrysogenum
ACRE_062880
I
ARB_05846
Arthroderma benhamiae
ARB_05846
I
MCYG_02590
Arthroderma otae
MCYG_02590
I
ANIA_01536
Aspergillus nidulans
CADANIAG00008163
D
CADANGAG00013191
Aspergillus niger
CADANGAG00013191
I
ATEG_04779
Aspergillus terreus
CADATEAG00007874
I
BDDG_07417
Blastomyces dermatitidis
BDDG_07417
N
PVAR5_2855
Byssochlamys spectabilis
PVAR5_2855
I
W97_01077
Coniosporium apollinis
W97_01077
I
GGTG_01969
Gaeumannomyces graminis
GGTG_01969
I
MPH_00439
Macrophomina phaseolina
MPH_00439
I
MAPG_06371
Magnaporthe poae
MAPG_06371
I
MGYG_08305
Microsporum gypseum
MGYG_08305
N
UCRNP2_4189
Neofusicoccum parvum
UCRNP2_4189
I
PABG_00183
Paracoccidioides brasiliensis
PABG_00183
N
PAAG_04842
Paracoccidioides sp lutzii
PAAG_04842
N
PMAA_009160
Penicillium marneffei
PMAA_009160
I
PDE_06458
Penicillium oxalicum
PDE_06458
I
SPBR_06799
Sporothrix brasiliensis
SPBR_06799
I
HMPREF1624_07612
Sporothrix schenckii
HMPREF1624_07612
I
PMAA_009160
Talaromyces marneffei
PMAA_009160
I
TSTA_058790
Talaromyces stipitatus
TSTA_058790
I
THITE_2112457
Thielavia terrestris
THITE_2112457
I
UCRPA7_6727
Togninia minima
UCRPA7_6727
I
TEQG_05652
Trichophyton equinum
TEQG_05652
I
H101_07631
Trichophyton interdigitale
H101_07631
I
H102_02966
Trichophyton rubrum
H102_02966
I
H105_02985
Trichophyton soudanense
H105_02985
I
TESG_01622
Trichophyton tonsurans
TESG_01622
I
TRV_01026
Trichophyton verrucosum
TRV_01026
I