myf6 (Oryzias latipes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSORLG00000016261 T036465_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Myf6
M00120_2.00 		Mus musculus
NCRNNTGNY
RNCANNYGN		 PBM
Badis et al.(2009)
Myf6_3824 		0.914 0.962
Myf6
M01742_2.00 		Mus musculus
RACAGHTGH
DCADCTGTY		 PBM
Weirauch et al.(2014)
pTH5099 		0.914 0.962
MYF6
M02780_2.00 		Homo sapiens
AACARCTGTY
RACAGYTGTT		 SELEX
Jolma et al.(2013)
MYF6_1 		0.914 0.962
MYF6
M04084_2.00 		Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV		 SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_1 		0.914 0.962
MYF6
M04085_2.00 		Homo sapiens
NRACASSTGWYV
BRWCASSTGTYN		 SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_2 		0.914 0.962
MYF6
M05831_2.00 		Homo sapiens
BRACAKNTGNY
RNCANMTGTYV		 SMiLE-seq
Isakova et al.(2017)
MYF6 		0.914 0.962
MYF6
M08717_2.00 		Homo sapiens
CASCTGC
GCAGSTG		 Misc
Kulakovskiy et al.(2013)
MYF6_HUMAN.H11MO.0.C 		0.914 0.962
Myf6
M08767_2.00 		Mus musculus
CASCTGC
GCAGSTG		 Misc
Kulakovskiy et al.(2013)
MYF6_MOUSE.H11MO.0.C 		0.914 0.962
MYF6
M09820_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MRF4_Q3 		0.914 0.962
MYF6
M04086_2.00 		Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV		 SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_1 		0.914 0.962
MYF6
M04087_2.00 		Homo sapiens
BAACASSTGWYV
BRWCASSTGTTV		 SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_2 		0.914 0.962
MYOG
M04098_2.00 		Homo sapiens
BRACAGCTGWCR
YGWCAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1 		0.883 0.846
MYOG
M04099_2.00 		Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN		 SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2 		0.883 0.846
MYOG
M04102_2.00 		Homo sapiens
NRACARCTGWCR
YGWCAGYTGTYN		 SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1 		0.883 0.846
MYOG
M04103_2.00 		Homo sapiens
NAACARYTGTYN
NRACARYTGTTN		 SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2 		0.883 0.846
Myog
M08061_2.00 		Mus musculus
RRCAGCTGVNN
NNBCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0500.1 		0.883 0.846
MYOG
M08721_2.00 		Homo sapiens
BHVCAGCTGYYNB
VNRRCAGCTGBDV		 Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B 		0.883 0.846
Myog
M08755_2.00 		Mus musculus
BHVCAGCTGYYNB
VNRRCAGCTGBDV		 Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A 		0.883 0.846
Myog
M09469_2.00 		Mus musculus
RACAGCTG
CAGCTGTY		 Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024 		0.883 0.846
MYOG
M09829_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01 		0.883 0.846
MYOG
M09830_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOGENIN_Q6 		0.883 0.846
MYOG
M04100_2.00 		Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1 		0.883 0.846
MYOG
M04101_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2 		0.883 0.846
MYOG
M04104_2.00 		Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1 		0.883 0.846
MYOG
M04105_2.00 		Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN		 SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2 		0.883 0.846
Myf5
M09463_2.00 		Mus musculus
NRRCAGCTGY
RCAGCTGYYN		 Misc
Heinz et al.(2010)
GM-Myf5_GSE24852 		0.841 0.788
MYF5
M09821_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYF5_Q6 		0.841 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000020357 bHLH 97 148

Links

Other bHLH family TFs
Other Oryzias latipes TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010630 Ailuropoda melanoleuca ENSAMEG00000010630 I
ZNF174 Callithrix jacchus ENSCJAG00000019642 I
ZNF174 Canis familiaris ENSCAFG00000028614 I
ENSCSAG00000010029 Chlorocebus sabaeus ENSCSAG00000010029 I
ZNF174 Choloepus hoffmanni ENSCHOG00000005839 I
ZNF174 Dasypus novemcinctus ENSDNOG00000032601 I
Zfp174 Dipodomys ordii ENSDORG00000009750 I
ZNF174 Erinaceus europaeus ENSEEUG00000009828 I
ZNF174 Felis catus ENSFCAG00000012275 I
ZNF174 Gorilla gorilla ENSGGOG00000016442 I
ZNF174 Homo sapiens ENSG00000103343 D
ENSSTOG00000013180 Ictidomys tridecemlineatus ENSSTOG00000013180 I
ENSP00000268655 Macaca fascicularis ENSP00000268655 I
ZNF174 Macaca mulatta ENSMMUG00000007568 I
ZNF174 Microcebus murinus ENSMICG00000014556 I
ENSMPUG00000015107 Mustela putorius furo ENSMPUG00000015107 I
Zfp174 Mus musculus ENSMUSG00000054939 I
Myotis_brandtii_ZNF174_10028052 Myotis brandtii Myotis_brandtii_ZNF174_10028052 I
ENSNLEG00000009651 Nomascus leucogenys ENSNLEG00000009651 I
ZNF174 Oryctolagus cuniculus ENSOCUG00000014506 I
ZNF174 Otolemur garnettii ENSOGAG00000024607 I
ENSOARG00000001724 Ovis aries ENSOARG00000001724 I
ZNF174 Pan troglodytes ENSPTRG00000007698 I
ENSPANG00000013691 Papio anubis ENSPANG00000013691 I
ENSPPYG00000007045 Pongo abelii ENSPPYG00000007045 I
ZNF174 Pteropus vampyrus ENSPVAG00000016536 I
Zfp174 Rattus norvegicus ENSRNOG00000007655 I
ZNF174 Sus scrofa ENSSSCG00000007958 I
ENSTSYG00000006900 Tarsius syrichta ENSTSYG00000006900 I
ZNF174 Tupaia belangeri ENSTBEG00000003372 I
ZNF174 Vicugna pacos ENSVPAG00000011268 I