CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSPFOG00000016659
(
Poecilia formosa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSPFOG00000016659
T036730_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hes1
M01726_2.00
Mus musculus
NVCACGYKNN
NNMRCGTGBN
PBM
Weirauch et al.(2014)
pTH5059
0.914
0.982
HES1
M04090_2.00
Homo sapiens
VVCACGYGHM
KDCRCGTGBB
SELEX
Yin et al.(2017)
HES1_eDBD_HT-SELEX
0.914
0.982
HES1
M09822_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q2
0.914
0.982
HES1
M09823_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q3
0.914
0.982
HES1
M09824_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q4
0.914
0.982
HES1
M09825_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q6
0.914
0.982
HES1
M04091_2.00
Homo sapiens
VNYACNYNHN
NDNRNGTRNB
SELEX
Yin et al.(2017)
HES1_eDBD_Methyl-HT-SELEX
0.914
0.982
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000016729
bHLH
46
103
RKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ
Links
Other
bHLH
family TFs
Other
Poecilia formosa
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g08192
Acanthocheilonema viteae
nAv.1.0.1.g08192
N
0.000
Bm6810
Brugia malayi
Bm6810
N
0.000
nDi.2.2.2.g00652
Dirofilaria immitis
nDi.2.2.2.g00652
N
0.000
DME_0001022801
Dracunculus medinensis
DME_0001022801
N
0.000
nLs.2.1.2.g02014
Litomosoides sigmodontis
nLs.2.1.2.g02014
N
0.000
LOAG_00892
Loa loa
LOAG_00892
N
0.000
OFLC_0001472101
Onchocerca flexuosa
OFLC_0001472101
N
0.000
nOo.2.0.1.g00487
Onchocerca ochengi
nOo.2.0.1.g00487
N
0.000
WBGene00245175
Onchocerca volvulus
WBGene00245175
N
0.000