NEUROD1 (Pan troglodytes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPTRG00000012702 T037039_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.914 1.000
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.914 1.000
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.914 1.000
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.914 1.000
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.914 1.000
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.914 1.000
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.914 1.000
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.914 1.000
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.879 0.962
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.879 0.962
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.879 0.962
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.879 0.962
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.879 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000021721 bHLH 102 154

Links

Other bHLH family TFs
Other Pan troglodytes TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31820 Aegilops tauschii F775_31820 N
BRADI4G02060 Brachypodium distachyon BRADI4G02060 N
gene22263-v1.0-hybrid Fragaria vesca gene22263-v1.0-hybrid N
MLOC_64240 Hordeum vulgare MLOC_64240 N
LPERR01G22040 Leersia perrieri LPERR01G22040 N
LPERR12G15510 Leersia perrieri LPERR12G15510 N
Lus10025078.g Linum usitatissimum Lus10025078.g N
Lus10024006.g Linum usitatissimum Lus10024006.g N
OBART12G18490 Oryza barthii OBART12G18490 N
OB12G25170 Oryza brachyantha OB12G25170 N
ORGLA12G0157500 Oryza glaberrima ORGLA12G0157500 N
OGLUM02G04830 Oryza glumaepatula OGLUM02G04830 N
OGLUM12G20140 Oryza glumaepatula OGLUM12G20140 N
BGIOSGA037778 Oryza indica BGIOSGA037778 N
OMERI12G13180 Oryza meridionalis OMERI12G13180 N
ONIVA12G17390 Oryza nivara ONIVA12G17390 N
OPUNC12G16690 Oryza punctata OPUNC12G16690 N
ORUFI12G20640 Oryza rufipogon ORUFI12G20640 N
OS12G0610600 Oryza sativa OS12G0610600 N
SELMODRAFT_69130 Selaginella moellendorffii SELMODRAFT_69130 N
SELMODRAFT_69131 Selaginella moellendorffii SELMODRAFT_69131 N
Solyc07g066330.2 Solanum lycopersicum Solyc07g066330.2 N
Traes_5AS_E5FD82E36 Triticum aestivum Traes_5AS_E5FD82E36 N
Traes_5BS_9F043AE17 Triticum aestivum Traes_5BS_9F043AE17 N