Neurod1 (Rattus norvegicus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSRNOG00000005609 T037180_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.914 1.000
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.914 1.000
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.914 1.000
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.914 1.000
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.914 1.000
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.914 1.000
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.914 1.000
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.914 1.000
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.879 0.962
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.879 0.962
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.879 0.962
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.879 0.962
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.879 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000007662 bHLH 102 154

Links

Other bHLH family TFs
Other Rattus norvegicus TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GG12467 Drosophila erecta FBgn0104755 N
p53 Drosophila melanogaster FBgn0039044 N
GE23990 Drosophila yakuba FBgn0241132 N