Arntl (Rattus norvegicus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSRNOG00000014448 T037207_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M09889_2.00		 Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 1.000
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 1.000
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 1.000
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 1.000
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 1.000
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 1.000
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 1.000
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000042830 bHLH 73 126

Links

Other bHLH family TFs
Other Rattus norvegicus TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI000357 Acyrthosiphon pisum ACYPI000357 I 0.000
AAEL006932 Aedes aegypti AAEL006932 I 0.000
ENSAMEG00000000718 Ailuropoda melanoleuca ENSAMEG00000000718 I 0.000
Alligator_sinensis_CCG001733.1 Alligator sinensis Alligator_sinensis_CCG001733.1 I 0.000
Alligator_sinensis_CCG010010.1 Alligator sinensis Alligator_sinensis_CCG010010.1 I 0.000
ENSAPLG00000013905 Anas platyrhynchos ENSAPLG00000013905 I 0.000
TFAP2B Anolis carolinensis ENSACAG00000005251 I 0.000
ENSACAG00000017357 Anolis carolinensis ENSACAG00000017357 I 0.000
AALB003833 Anopheles albimanus AALB003833 I 0.000
AARA002676 Anopheles arabiensis AARA002676 I 0.000
AATE014474 Anopheles atroparvus AATE014474 I 0.000
ACOM041150 Anopheles coluzzii ACOM041150 I 0.000
ACUA015133 Anopheles culicifacies ACUA015133 I 0.000
ADIR000123 Anopheles dirus ADIR000123 I 0.000
AEPI000456 Anopheles epiroticus AEPI000456 I 0.000
AFAF007133 Anopheles farauti AFAF007133 I 0.000
AFUN005769 Anopheles funestus AFUN005769 I 0.000
AGAP011625 Anopheles gambiae AGAP011625 I 0.000
AMAM003187 Anopheles maculatus AMAM003187 I 0.000
AMEC019970 Anopheles melas AMEC019970 I 0.000
AMEM004222 Anopheles merus AMEM004222 I 0.000
AMIN008818 Anopheles minimus AMIN008818 I 0.000
AQUA002126 Anopheles quadriannulatus AQUA002126 I 0.000
ASIS021760 Anopheles sinensis ASIS021760 I 0.000
ASTEI10011 Anopheles stephensi ASTEI10011 I 0.000
GB50795 Apis mellifera GB50795 I 0.000
ENSAMXG00000001868 Astyanax mexicanus ENSAMXG00000001868 I 0.000
BGIBMGA004491 Bombyx mori BGIBMGA004491 N 0.000
yakG031910 Bos grunniens yakG031910 I 0.000
e_gw.327.57.1 Branchiostoma floridae e_gw.327.57.1 I 0.000
fgenesh2_pg.scaffold_585000001 Branchiostoma floridae fgenesh2_pg.scaffold_585000001 I 0.000
Brh_R005153 Buceros rhinoceros Brh_R005153 I 0.000
Brh_R009982 Buceros rhinoceros Brh_R009982 I 0.000
TFAP2E Callithrix jacchus ENSCJAG00000001531 I 0.000
Aan_R002198 Calypte anna Aan_R002198 I 0.000
Aan_R015525 Calypte anna Aan_R015525 I 0.000
Cflo_04369--XP_394369.3_APIME Camponotus floridanus Cflo_04369--XP_394369.3_APIME N 0.000
TFAP2E Cavia porcellus ENSCPOG00000024445 I 0.000
Cmyd_10017480 Chelonia mydas Cmyd_10017480 I 0.000
ENSCSAG00000001086 Chlorocebus sabaeus ENSCSAG00000001086 I 0.000
CLEC012898 Cimex lectularius CLEC012898 N 0.000
CGI_10015578 Crassostrea gigas CGI_10015578 I 0.000
CpipJ_CPIJ013984 Culex pipiens CpipJ_CPIJ013984 I 0.000
CPIJ013984 Culex quinquefasciatus CPIJ013984 I 0.000
tfap2b Danio rerio ENSDARG00000012667 I 0.000
tfap2a Danio rerio ENSDARG00000059279 I 0.000
TFAP2E Dasypus novemcinctus ENSDNOG00000036871 I 0.000
ENSETEG00000019509 Echinops telfairi ENSETEG00000019509 I 0.000
TFAP2E Equus caballus ENSECAG00000003027 I 0.000
ENSFALG00000012772 Ficedula albicollis ENSFALG00000012772 I 0.000
ENSGMOG00000013321 Gadus morhua ENSGMOG00000013321 I 0.000
TFAP2B Gallus gallus ENSGALG00000016680 I 0.000
Gfo_R000728 Geospiza fortis Gfo_R000728 I 0.000
TFAP2E Gorilla gorilla ENSGGOG00000009762 I 0.000
Hsal_09863--XP_394369.3_APIME Harpegnathos saltator Hsal_09863--XP_394369.3_APIME N 0.000
HMEL016834 Heliconius melpomene HMEL016834 I 0.000
TFAP2E Homo sapiens ENSG00000116819 D 0.000
ENSSTOG00000001781 Ictidomys tridecemlineatus ENSSTOG00000001781 I 0.000
ENSLACG00000016799 Latimeria chalumnae ENSLACG00000016799 I 0.000
ENSLOCG00000006963 Lepisosteus oculatus ENSLOCG00000006963 I 0.000
ENSLOCG00000013190 Lepisosteus oculatus ENSLOCG00000013190 I 0.000
ENSLOCG00000016338 Lepisosteus oculatus ENSLOCG00000016338 I 0.000
LotgiG121066 Lottia gigantea LotgiG121066 I 0.000
TFAP2B Loxodonta africana ENSLAFG00000027209 I 0.000
TFAP2E Loxodonta africana ENSLAFG00000029444 I 0.000
ENSMMUP00000026047 Macaca fascicularis ENSMMUP00000026047 I 0.000
TFAP2E Macaca mulatta ENSMMUG00000019815 I 0.000
ENSMGAG00000014245 Meleagris gallopavo ENSMGAG00000014245 I 0.000
TFAP2B Microcebus murinus ENSMICG00000017317 I 0.000
TFAP2B Monodelphis domestica ENSMODG00000018831 I 0.000
ENSMPUG00000014894 Mustela putorius furo ENSMPUG00000014894 I 0.000
Tfap2e Mus musculus ENSMUSG00000042477 D 0.000
NV15391 Nasonia vitripennis NV15391 I 0.000
ENSNLEG00000011088 Nomascus leucogenys ENSNLEG00000011088 I 0.000
ENSNLEG00000003972 Nomascus leucogenys ENSNLEG00000003972 I 0.000
ENSONIG00000006816 Oreochromis niloticus ENSONIG00000006816 I 0.000
TFAP2C Ornithorhynchus anatinus ENSOANG00000009253 I 0.000
ENSORLG00000017695 Oryzias latipes ENSORLG00000017695 I 0.000
ENSOARG00000019518 Ovis aries ENSOARG00000019518 I 0.000
TFAP2E Pan troglodytes ENSPTRG00000000523 I 0.000
ENSPSIG00000010979 Pelodiscus sinensis ENSPSIG00000010979 I 0.000
ENSPSIG00000011168 Pelodiscus sinensis ENSPSIG00000011168 I 0.000
ENSPFOG00000016070 Poecilia formosa ENSPFOG00000016070 I 0.000
ENSPFOG00000015812 Poecilia formosa ENSPFOG00000015812 I 0.000
Pvit_00888 Pogona vitticeps Pvit_00888 I 0.000
ENSPPYG00000001556 Pongo abelii ENSPPYG00000001556 I 0.000
SBAD_0001196601 Soboliphyme baturini SBAD_0001196601 N 0.000
SINV20008 Solenopsis invicta SINV20008 N 0.000
TFAP2B Taeniopygia guttata ENSTGUG00000013267 I 0.000
tetur36g00810 Tetranychus urticae tetur36g00810 I 0.000
tfap2e.L Xenopus laevis XB-GENE-876809 I 0.000
tfap2b.L Xenopus laevis XB-GENE-1188127 I 0.000
tfap2e Xenopus tropicalis XB-GENE-876803 I 0.000
tfap2b Xenopus tropicalis XB-GENE-485026 I 0.000
ENSXMAG00000005803 Xiphophorus maculatus ENSXMAG00000005803 I 0.000
ENSXMAG00000006217 Xiphophorus maculatus ENSXMAG00000006217 I 0.000
ENSXMAG00000012878 Xiphophorus maculatus ENSXMAG00000012878 I 0.000
L798_10151 Zootermopsis nevadensis L798_10151 I 0.000