TCF4 (Sorex araneus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSARG00000001666 T037261_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.847 0.909
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.847 0.909
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.847 0.909
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.847 0.909
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.847 0.909
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.847 0.909
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.847 0.909
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.847 0.909
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.845 0.864
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.845 0.864
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.845 0.864
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.845 0.864
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.845 0.864
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.845 0.864
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.845 0.864
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.845 0.864
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.845 0.864
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.845 0.864
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.845 0.864
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.845 0.864
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.845 0.864
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.845 0.864
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.845 0.841
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.845 0.841
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.845 0.841
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000001519 bHLH 568 613

Links

Other bHLH family TFs
Other Sorex araneus TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010612 Ailuropoda melanoleuca ENSAMEG00000010612 I 0.845
ENSAMEG00000017162 Ailuropoda melanoleuca ENSAMEG00000017162 I 0.847
Alligator_sinensis_CCG017304.1 Alligator sinensis Alligator_sinensis_CCG017304.1 I 0.845
Alligator_sinensis_CCG017823.1 Alligator sinensis Alligator_sinensis_CCG017823.1 I 0.847
ENSAPLG00000011135 Anas platyrhynchos ENSAPLG00000011135 I 0.847
TCF4 Anolis carolinensis ENSACAG00000008863 I 0.847
TCF12 Anolis carolinensis ENSACAG00000014277 I 0.845
Afo_R000660 Aptenodytes forsteri Afo_R000660 I 0.847
Afo_R014990 Aptenodytes forsteri Afo_R014990 I 0.845
ENSAMXG00000009833 Astyanax mexicanus ENSAMXG00000009833 I 0.847
ENSAMXG00000014804 Astyanax mexicanus ENSAMXG00000014804 I 0.845
ENSBTAP00000048638-D1 Bos grunniens ENSBTAP00000048638-D1 I 0.845
ENSP00000381382-D1 Bos grunniens ENSP00000381382-D1 I 0.847
TCF12 Bos taurus ENSBTAG00000002586 I 0.845
TCF3 Bos taurus ENSBTAG00000008695 I 0.845
TCF4 Bos taurus ENSBTAG00000016462 I 0.847
TCF4 Callithrix jacchus ENSCJAG00000004038 I 0.847
Aan_R011985 Calypte anna Aan_R011985 I 0.845
TCF4 Canis familiaris ENSCAFG00000000140 I 0.847
TCF12 Canis familiaris ENSCAFG00000016200 I 0.845
TCF12 Cavia porcellus ENSCPOG00000009153 I 0.845
Cmyd_10020160 Chelonia mydas Cmyd_10020160 I 0.847
ENSCSAG00000011901 Chlorocebus sabaeus ENSCSAG00000011901 I 0.845
ENSCSAG00000018141 Chlorocebus sabaeus ENSCSAG00000018141 I 0.847
TCF4 Choloepus hoffmanni ENSCHOG00000000331 I 0.847
TCF12 Choloepus hoffmanni ENSCHOG00000003168 I 0.845
tcf12 Danio rerio ENSDARG00000004714 I 0.845
ENSDNOG00000013859 Dasypus novemcinctus ENSDNOG00000013859 I 0.847
ENSDNOG00000042880 Dasypus novemcinctus ENSDNOG00000042880 I 0.845
Tcf4 Dipodomys ordii ENSDORG00000012697 I 0.847
TCF4 Echinops telfairi ENSETEG00000001948 I 0.893
TCF3 Equus caballus ENSECAG00000000623 I 0.845
TCF12 Equus caballus ENSECAG00000011678 I 0.845
TCF4 Equus caballus ENSECAG00000017265 I 0.847
TCF4 Erinaceus europaeus ENSEEUG00000000134 I 0.847
TCF12 Erinaceus europaeus ENSEEUG00000002182 I 0.845
TCF4 Felis catus ENSFCAG00000014682 I 0.847
TCF12 Felis catus ENSFCAG00000031674 I 0.845
ENSFALG00000012146 Ficedula albicollis ENSFALG00000012146 I 0.845
ENSGMOG00000015710 Gadus morhua ENSGMOG00000015710 I 0.847
ENSGMOG00000018104 Gadus morhua ENSGMOG00000018104 I 0.847
TCF12 Gallus gallus ENSGALG00000004304 I 0.845
ENSGACG00000000628 Gasterosteus aculeatus ENSGACG00000000628 I 0.847
TCF12 Gasterosteus aculeatus ENSGACG00000006101 I 0.845
tcf12 Gasterosteus aculeatus ENSGACG00000015831 I 0.845
Gfo_R004309 Geospiza fortis Gfo_R004309 I 0.845
TCF12 Gorilla gorilla ENSGGOG00000008166 I 0.845
TCF4 Gorilla gorilla ENSGGOG00000016297 I 0.847
TCF12 Homo sapiens ENSG00000140262 D 0.845
TCF4 Homo sapiens ENSG00000196628 D 0.847
ENSSTOG00000001523 Ictidomys tridecemlineatus ENSSTOG00000001523 I 0.845
ENSSTOG00000005134 Ictidomys tridecemlineatus ENSSTOG00000005134 I 0.847
ENSLACG00000003485 Latimeria chalumnae ENSLACG00000003485 I 0.847
ENSLACG00000014145 Latimeria chalumnae ENSLACG00000014145 I 0.845
ENSLOCG00000003538 Lepisosteus oculatus ENSLOCG00000003538 I 0.847
ENSLOCG00000013539 Lepisosteus oculatus ENSLOCG00000013539 I 0.845
TCF12 Loxodonta africana ENSLAFG00000010546 I 0.845
TCF4 Loxodonta africana ENSLAFG00000013449 I 0.847
TCF3 Loxodonta africana ENSLAFG00000026277 I 0.845
ENSP00000331057 Macaca fascicularis ENSP00000331057 I 0.845
ENSP00000381382 Macaca fascicularis ENSP00000381382 I 0.847
TCF12 Macaca mulatta ENSMMUG00000004091 I 0.845
TCF4 Macaca mulatta ENSMMUG00000012001 I 0.847
ENSMEUG00000003794 Macropus eugenii ENSMEUG00000003794 I 0.847
TCF3 Meleagris gallopavo ENSMGAG00000002388 I 0.841
ENSMGAG00000005667 Meleagris gallopavo ENSMGAG00000005667 I 0.845
TCF12 Microcebus murinus ENSMICG00000009110 I 0.845
TCF4 Microcebus murinus ENSMICG00000012305 I 0.847
TCF12 Monodelphis domestica ENSMODG00000008311 I 0.845
TCF4 Monodelphis domestica ENSMODG00000020455 I 0.847
ENSMPUG00000004438 Mustela putorius furo ENSMPUG00000004438 I 0.845
ENSMPUG00000016460 Mustela putorius furo ENSMPUG00000016460 I 0.847
Tcf3 Mus musculus ENSMUSG00000020167 D 0.845
Tcf12 Mus musculus ENSMUSG00000032228 D 0.845
Tcf4 Mus musculus ENSMUSG00000053477 D 0.847
Myotis_brandtii_Tcf12_10010436 Myotis brandtii Myotis_brandtii_Tcf12_10010436 I 0.845
Myotis_brandtii_Tcf4_10017301 Myotis brandtii Myotis_brandtii_Tcf4_10017301 I 0.847
TCF12 Myotis lucifugus ENSMLUG00000006205 I 0.845
ENSMLUG00000012927 Myotis lucifugus ENSMLUG00000012927 I 0.847
ENSNLEG00000006707 Nomascus leucogenys ENSNLEG00000006707 I 0.845
ENSNLEG00000007981 Nomascus leucogenys ENSNLEG00000007981 I 0.847
Ogr02020 Ophisaurus gracilis Ogr02020 I 0.847
Ogr11405 Ophisaurus gracilis Ogr11405 I 0.845
ENSONIG00000005794 Oreochromis niloticus ENSONIG00000005794 I 0.845
ENSONIG00000008337 Oreochromis niloticus ENSONIG00000008337 I 0.845
ENSONIG00000012720 Oreochromis niloticus ENSONIG00000012720 I 0.847
TCF4 Ornithorhynchus anatinus ENSOANG00000003082 I 0.847
TCF12 Ornithorhynchus anatinus ENSOANG00000009462 I 0.845
TCF4 Oryctolagus cuniculus ENSOCUG00000002669 I 0.847
TCF12 Oryctolagus cuniculus ENSOCUG00000017812 I 0.845
TCF12 Oryzias latipes ENSORLG00000005330 I 0.845
tcf12 Oryzias latipes ENSORLG00000008508 I 0.845
ENSORLG00000015062 Oryzias latipes ENSORLG00000015062 I 0.847
ENSOGAG00000005735 Otolemur garnettii ENSOGAG00000005735 I 0.847
TCF12 Otolemur garnettii ENSOGAG00000006485 I 0.845
ENSOARG00000005018 Ovis aries ENSOARG00000005018 I 0.847
ENSOARG00000020872 Ovis aries ENSOARG00000020872 I 0.845
TCF12 Pan troglodytes ENSPTRG00000007109 I 0.845
TCF4 Pan troglodytes ENSPTRG00000010040 I 0.847
ENSPANG00000017265 Papio anubis ENSPANG00000017265 I 0.845
ENSPSIG00000011880 Pelodiscus sinensis ENSPSIG00000011880 I 0.845
ENSPSIG00000014469 Pelodiscus sinensis ENSPSIG00000014469 I 0.847
ENSPMAG00000000958 Petromyzon marinus ENSPMAG00000000958 I 0.847
ENSPFOG00000004140 Poecilia formosa ENSPFOG00000004140 I 0.845
ENSPFOG00000009937 Poecilia formosa ENSPFOG00000009937 I 0.847
ENSPFOG00000024249 Poecilia formosa ENSPFOG00000024249 I 0.845
Pvit_17395 Pogona vitticeps Pvit_17395 I 0.845
Pvit_19114 Pogona vitticeps Pvit_19114 I 0.847
ENSPPYG00000006505 Pongo abelii ENSPPYG00000006505 I 0.845
ENSPPYG00000009175 Pongo abelii ENSPPYG00000009175 I 0.847
TCF4 Pteropus vampyrus ENSPVAG00000002074 I 0.847
TCF12 Pteropus vampyrus ENSPVAG00000006184 I 0.845
Tcf4 Rattus norvegicus ENSRNOG00000012405 I 0.847
Tcf3 Rattus norvegicus ENSRNOG00000051499 I 0.845
Tcf12 Rattus norvegicus ENSRNOG00000057754 I 0.845
ENSSHAG00000014955 Sarcophilus harrisii ENSSHAG00000014955 I 0.847
ENSSHAG00000015935 Sarcophilus harrisii ENSSHAG00000015935 I 0.845
TCF12 Sorex araneus ENSSARG00000013798 I 0.845
TCF4 Sus scrofa ENSSSCG00000004535 I 0.914
TCF12 Taeniopygia guttata ENSTGUG00000006270 I 0.845
TCF12 Takifugu rubripes ENSTRUG00000008110 I 0.845
ENSTSYG00000009264 Tarsius syrichta ENSTSYG00000009264 I 0.845
ENSTSYG00000009542 Tarsius syrichta ENSTSYG00000009542 I 0.847
ENSTNIG00000013705 Tetraodon nigroviridis ENSTNIG00000013705 I 0.845
TCF12 Tupaia belangeri ENSTBEG00000002192 I 0.845
TCF4 Tupaia belangeri ENSTBEG00000015498 I 0.847
TCF12 Tursiops truncatus ENSTTRG00000010817 I 0.845
TCF4 Tursiops truncatus ENSTTRG00000011542 I 0.847
TCF12 Vicugna pacos ENSVPAG00000006545 I 0.845
tcf4.S Xenopus laevis XB-GENE-1011632 I 0.847
tcf12.L Xenopus laevis XB-GENE-5799717 I 0.845
tcf4 Xenopus tropicalis XB-GENE-1011628 I 0.847
tcf12 Xenopus tropicalis XB-GENE-5799694 I 0.845
ENSXMAG00000011822 Xiphophorus maculatus ENSXMAG00000011822 I 0.847
ENSXMAG00000014303 Xiphophorus maculatus ENSXMAG00000014303 I 0.845