CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSSHAG00000008330
(
Sarcophilus harrisii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSSHAG00000008330
T037322_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.880
0.885
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.880
0.885
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.880
0.885
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.880
0.885
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.880
0.885
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.880
0.885
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.880
0.885
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.880
0.885
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.845
0.865
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.845
0.865
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.845
0.865
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.845
0.865
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.845
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000009628
bHLH
91
143
RRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALS
Links
Other
bHLH
family TFs
Other
Sarcophilus harrisii
TFs
269 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLIG1
Bos taurus
ENSBTAG00000037547
I
OLIG2
Callithrix jacchus
ENSCJAG00000009439
I
OLIG1
Canis familiaris
ENSCAFG00000031953
I
ENSCPOG00000020839
Cavia porcellus
ENSCPOG00000020839
I
ENSCSAG00000018686
Chlorocebus sabaeus
ENSCSAG00000018686
I
OLIG1
Dasypus novemcinctus
ENSDNOG00000042196
I
ENSETEG00000011024
Echinops telfairi
ENSETEG00000011024
I
OLIG1
Homo sapiens
ENSG00000184221
D
ENSSTOG00000027713
Ictidomys tridecemlineatus
ENSSTOG00000027713
I
ENSLOCG00000017507
Lepisosteus oculatus
ENSLOCG00000017507
I
ENSLAFG00000007964
Loxodonta africana
ENSLAFG00000007964
I
OLIG1
Macaca mulatta
ENSMMUG00000001558
I
OLIG1
Monodelphis domestica
ENSMODG00000021070
I
Olig1
Mus musculus
ENSMUSG00000046160
I
ENSNLEG00000003823
Nomascus leucogenys
ENSNLEG00000003823
I
OLIG1
Ochotona princeps
ENSOPRG00000007722
I
Ogr17935
Ophisaurus gracilis
Ogr17935
I
ENSOANG00000002423
Ornithorhynchus anatinus
ENSOANG00000002423
I
OLIG1
Otolemur garnettii
ENSOGAG00000033584
I
OLIG1
Pan troglodytes
ENSPTRG00000031440
I
Pvit_10684
Pogona vitticeps
Pvit_10684
I
OLIG1
Pteropus vampyrus
ENSPVAG00000001702
I
Olig1
Rattus norvegicus
ENSRNOG00000028648
I
ENSSHAG00000004906
Sarcophilus harrisii
ENSSHAG00000004906
I
OLIG1
Sus scrofa
ENSSSCG00000012040
I
OLIG1
Vicugna pacos
ENSVPAG00000005098
I
olig1
Xenopus tropicalis
XB-GENE-478472
I