FERD3L (Sus scrofa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSSCG00000015371 T037438_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FERD3L
M04140_2.00 		Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1 		0.914 1.000
FERD3L
M04141_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2 		0.914 1.000
FERD3L
M04142_2.00 		Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1 		0.914 1.000
FERD3L
M04143_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2 		0.914 1.000
Fer3
M05993_2.00 		Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC		 B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937 		0.890 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000016299 bHLH 100 152

Links

Other bHLH family TFs
Other Sus scrofa TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_198669 Agaricus bisporus AGABI2DRAFT_198669 I 0.000
BOTBODRAFT_358406 Botryobasidium botryosum BOTBODRAFT_358406 N 0.000
CAGL0F09097g Candida glabrata CAGL0F09097g I 0.000
CC1G_08281 Coprinopsis cinerea CC1G_08281 I 0.000
DRE_02870 Drechslerella stenobrocha DRE_02870 I 0.000
GALMADRAFT_708662 Galerina marginata GALMADRAFT_708662 N 0.000
GALMADRAFT_56038 Galerina marginata GALMADRAFT_56038 N 0.000
GALMADRAFT_55133 Galerina marginata GALMADRAFT_55133 N 0.000
GALMADRAFT_439371 Galerina marginata GALMADRAFT_439371 N 0.000
GALMADRAFT_439138 Galerina marginata GALMADRAFT_439138 N 0.000
GALMADRAFT_39494 Galerina marginata GALMADRAFT_39494 N 0.000
GALMADRAFT_118766 Galerina marginata GALMADRAFT_118766 I 0.000
GALMADRAFT_1170770 Galerina marginata GALMADRAFT_1170770 N 0.000
GALMADRAFT_710225 Galerina marginata GALMADRAFT_710225 N 0.000
GALMADRAFT_924624 Galerina marginata GALMADRAFT_924624 N 0.000
GLOTRDRAFT_119791 Gloeophyllum trabeum GLOTRDRAFT_119791 I 0.000
M413DRAFT_446777 Hebeloma cylindrosporum M413DRAFT_446777 I 0.000
M413DRAFT_349844 Hebeloma cylindrosporum M413DRAFT_349844 N 0.000
HETIRDRAFT_380701 Heterobasidion irregulare HETIRDRAFT_380701 N 0.000
HCBG_02664 Histoplasma capsulatum HCBG_02664 I 0.000
JAAARDRAFT_55946 Jaapia argillacea JAAARDRAFT_55946 I 0.000
PAS_chr3_1235 Komagataella pastoris PAS_chr3_1235 I 0.000
KUCA_T00002649001 Kuraishia capsulata KUCA_T00002649001 I 0.000
K443DRAFT_103561 Laccaria amethystina K443DRAFT_103561 N 0.000
LACBIDRAFT_300067 Laccaria bicolor LACBIDRAFT_300067 I 0.000
SAKL0B12408g Lachancea kluyveri SAKL0B12408g I 0.000
MGG_03516 Magnaporthe oryzae MGG_03516 I 0.000
MAPG_11530 Magnaporthe poae MAPG_11530 I 0.000
MELLADRAFT_78083 Melampsora laricipopulina MELLADRAFT_78083 N 0.000
MPER_08472 Moniliophthora perniciosa MPER_08472 N 0.000
Moror_15941 Moniliophthora roreri Moror_15941 N 0.000
NBO_73g0011 Nosema bombycis NBO_73g0011 N 0.000
HPODL_02729 Ogataea parapolymorpha HPODL_02729 I 0.000
PAXRUDRAFT_831203 Paxillus rubicundulus PAXRUDRAFT_831203 I 0.000
PHACADRAFT_119777 Phanerochaete carnosa PHACADRAFT_119777 I 0.000
gww2.5.554.1 Phanerochaete chrysosporium gww2.5.554.1 N 0.000
PHLGIDRAFT_123599 Phlebiopsis gigantea PHLGIDRAFT_123599 I 0.000
XP_002493129.1 Pichia pastoris XP_002493129.1 I 0.000
PILCRDRAFT_82281 Piloderma croceum PILCRDRAFT_82281 N 0.000
PIIN_00347 Piriformospora indica PIIN_00347 N 0.000
M404DRAFT_42467 Pisolithus tinctorius M404DRAFT_42467 I 0.000
M404DRAFT_143892 Pisolithus tinctorius M404DRAFT_143892 I 0.000
PLEOSDRAFT_1087686 Pleurotus ostreatus PLEOSDRAFT_1087686 I 0.000
POSPLDRAFT_38710 Postia placenta POSPLDRAFT_38710 N 0.000
PAN0_006c2853 Pseudozyma antarctica PAN0_006c2853 I 0.000
PSEUBRA_SCAF7g04459 Pseudozyma brasiliensis PSEUBRA_SCAF7g04459 I 0.000
PFL1_05463 Pseudozyma flocculosa PFL1_05463 N 0.000
PHSY_006817 Pseudozyma hubeiensis PHSY_006817 I 0.000
V565_131540 Rhizoctonia solani V565_131540 I 0.000
RO3G_10499 Rhizopus oryzae RO3G_10499 I 0.000
SCHCODRAFT_65208 Schizophyllum commune SCHCODRAFT_65208 I 0.000
SPOG_04721 Schizosaccharomyces cryophilus SPOG_04721 I 0.000
SOCG_03169 Schizosaccharomyces octosporus SOCG_03169 I 0.000
prr1 Schizosaccharomyces pombe SPAC8C9.14 I 0.000
M408DRAFT_138020 Serendipita vermifera M408DRAFT_138020 I 0.000
SPPG_07283 Spizellomyces punctatus SPPG_07283 I 0.000
SPPG_00235 Spizellomyces punctatus SPPG_00235 I 0.000
sr14344 Sporisorium reilianum sr14344 N 0.000
CY34DRAFT_809035 Suillus luteus CY34DRAFT_809035 I 0.000
TTHERM_00794590 Tetrahymena thermophila TTHERM_00794590 N 0.000
BN946_scf184843.g9 Trametes cinnabarina BN946_scf184843.g9 I 0.000
M407DRAFT_88338 Tulasnella calospora M407DRAFT_88338 I 0.000
UHOR_05198 Ustilago hordei UHOR_05198 I 0.000
J056_000339 Wallemia ichthyophaga J056_000339 I 0.000