USF1 (Tupaia belangeri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTBEG00000003164 T037572_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Usf1
M01732_2.00 		Mus musculus
NRYCACGTGNN
NNCACGTGRYN		 PBM
Weirauch et al.(2014)
pTH4376 		0.914 1.000
USF1
M02792_2.00 		Homo sapiens
RNCACGTGRY
RYCACGTGNY		 SELEX
Jolma et al.(2013)
USF1_1 		0.914 1.000
USF1
M04146_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX 		0.914 1.000
USF1
M08056_2.00 		Homo sapiens
RGTCACRTGVB
VBCAYGTGACY		 ChIP-seq
Mathelier et al.(2014)
MA0093.2 		0.914 1.000
USF1
M07807_2.00 		Homo sapiens
VGTCACGTGRBSVVV
BBBSVYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha 		0.914 1.000
USF1
M07808_2.00 		Homo sapiens
VVGTCACGTGVBSVS
SBSVBCACGTGACBB		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha 		0.914 1.000
USF1
M07809_2.00 		Homo sapiens
RGTCACGTGVBSVNN
NNBSVBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha 		0.914 1.000
USF1
M07810_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha 		0.914 1.000
USF1
M07811_2.00 		Homo sapiens
NVGTCACGTGVSSV
BSSBCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha 		0.914 1.000
USF1
M08733_2.00 		Homo sapiens
VGTCACGTGVBS
SVBCACGTGACB		 Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A 		0.914 1.000
Usf1
M08756_2.00 		Mus musculus
NNGTCACGTGVBS
SVBCACGTGACNN		 Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A 		0.914 1.000
USF1
M09460_2.00 		Homo sapiens
YCACGTGRBN
NVYCACGTGR		 Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465 		0.914 1.000
USF1
M09867_2.00 		Homo sapiens
NNRYCACGTGRYNN
NNRYCACGTGRYNN		 Transfac
Matys et al.(2006)
V$USF_01 		0.914 1.000
USF1
M09868_2.00 		Homo sapiens
NNRNCAYRTGNYNN
NNRNCAYRTGNYNN		 Transfac
Matys et al.(2006)
V$USF_02 		0.914 1.000
USF1
M09869_2.00 		Homo sapiens
HCACGTGH
DCACGTGD		 Transfac
Matys et al.(2006)
V$USF_C 		0.914 1.000
USF1
M04147_2.00 		Homo sapiens
VHCAYGTGAYN
NRTCACRTGDB		 SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTBEP00000002731 bHLH 142 197

Links

Other bHLH family TFs
Other Tupaia belangeri TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB004533 Anopheles albimanus AALB004533 N
AATE016185 Anopheles atroparvus AATE016185 N
ACHR000725 Anopheles christyi ACHR000725 N
ACUA010210 Anopheles culicifacies ACUA010210 N
AFAF018005 Anopheles farauti AFAF018005 N
AFUN002062 Anopheles funestus AFUN002062 N
AGAP007377 Anopheles gambiae AGAP007377 N
AMEM006703 Anopheles merus AMEM006703 N
AMIN010495 Anopheles minimus AMIN010495 N
AQUA004502 Anopheles quadriannulatus AQUA004502 N
ASIS000748 Anopheles sinensis ASIS000748 N
ASTEI01332 Anopheles stephensi ASTEI01332 N
GB50960 Apis mellifera GB50960 N
ACEP23771 Atta cephalotes ACEP23771 N
GF25133 Drosophila ananassae FBgn0102125 N
GG15376 Drosophila erecta FBgn0107628 N
GH15946 Drosophila grimshawi FBgn0123417 N
MTF-1 Drosophila melanogaster FBgn0040305 N
GI16598 Drosophila mojavensis FBgn0139346 N
GL17877 Drosophila persimilis FBgn0155480 N
GA17655 Drosophila pseudoobscura FBgn0077666 N
GM25148 Drosophila sechellia FBgn0180009 N
GD14182 Drosophila simulans FBgn0185869 N
GJ12850 Drosophila virilis FBgn0200085 N
GK17576 Drosophila willistoni FBgn0219575 N
GE20840 Drosophila yakuba FBgn0238131 N
LDEC021755 Leptinotarsa decemlineata LDEC021755 N
LLOJ005404 Lutzomyia longipalpis LLOJ005404 N
MDOA009916 Musca domestica MDOA009916 N
NV16132 Nasonia vitripennis NV16132 N
PPAI003792 Phlebotomus papatasi PPAI003792 N