ARNT (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000008064 T037730_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arnt
M01719_2.00 		Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN		 PBM
Weirauch et al.(2014)
pTH5111 		0.914 1.000
ARNT
M08732_2.00 		Homo sapiens
NKRCGTGMN
NKCACGYMN		 Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B 		0.914 1.000
ARNT
M09459_2.00 		Homo sapiens
KCACGTNN
NNACGTGM		 Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937 		0.914 1.000
ARNT
M09863_2.00 		Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN		 Transfac
Matys et al.(2006)
V$ARNT_01 		0.914 1.000
ARNT
M09864_2.00 		Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB		 Transfac
Matys et al.(2006)
V$ARNT_02 		0.914 1.000
ARNT
M09865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6_01 		0.914 1.000
ARNT
M09866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6 		0.914 1.000
tgo
M06005_2.00 		Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY		 B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06006_2.00 		Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS		 B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014 		0.914 0.926
tgo
M06007_2.00 		Drosophila melanogaster
KCACGTGAC
GTCACGTGM		 B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06008_2.00 		Drosophila melanogaster
RTACGTGAC
GTCACGTAY		 B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06009_2.00 		Drosophila melanogaster
VWACGTGACY
RGTCACGTWB		 B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06010_2.00 		Drosophila melanogaster
TGCGTGAC
GTCACGCA		 B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06011_2.00 		Drosophila melanogaster
RCACGTGAC
GTCACGTGY		 B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06012_2.00 		Drosophila melanogaster
VTACGTGACB
VGTCACGTAB		 B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014 		0.914 0.926
Arnt2
M01720_2.00 		Mus musculus
NCAYRTGMNN
NNKCAYRTGN		 PBM
Weirauch et al.(2014)
pTH5159 		0.862 0.944
ARNT2
M04170_2.00 		Homo sapiens
RDCACGTGMN
NKCACGTGHY		 SELEX
Yin et al.(2017)
ARNT2_eDBD_HT-SELEX 		0.862 0.944
Arnt2
M09888_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT2_01 		0.862 0.944
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000010888 bHLH 74 127

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G48330 Brachypodium distachyon BRADI1G48330 N
MLOC_71770 Hordeum vulgare MLOC_71770 N
LPERR06G03990 Leersia perrieri LPERR06G03990 N
OB06G14080 Oryza brachyantha OB06G14080 N
ORGLA06G0040900 Oryza glaberrima ORGLA06G0040900 N
OGLUM06G04550 Oryza glumaepatula OGLUM06G04550 N
BGIOSGA022379 Oryza indica BGIOSGA022379 N
OMERI06G05540 Oryza meridionalis OMERI06G05540 N
ONIVA06G05620 Oryza nivara ONIVA06G05620 N
OPUNC06G04230 Oryza punctata OPUNC06G04230 N
ORUFI06G04410 Oryza rufipogon ORUFI06G04410 N
OS06G0166200 Oryza sativa OS06G0166200 N
Pavir.J33131 Panicum virgatum Pavir.J33131 N
Si006584m.g Setaria italica Si006584m.g N
Sb10g004570 Sorghum bicolor Sb10g004570 N
GRMZM2G086277 Zea mays GRMZM2G086277 N