tfap4 (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000009740 T037741_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.914 0.962
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.914 0.962
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.914 0.962
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.914 0.962
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.914 0.962
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.914 0.962
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.914 0.962
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.914 0.962
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.914 0.962
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.914 0.962
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.914 0.962
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.914 0.962
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.914 0.962
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.914 0.962
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.914 0.962
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.914 0.962
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.914 0.962
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.914 0.962
crp
M03595_2.00 		Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT		 SELEX
Nitta et al.(2015)
crp_1 		0.843 0.808
crp
M05937_2.00 		Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB		 B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994 		0.843 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000012626 bHLH 49 100

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010499 Ailuropoda melanoleuca ENSAMEG00000010499 I
Alligator_sinensis_CCG008027.1 Alligator sinensis Alligator_sinensis_CCG008027.1 I
MAFF Anolis carolinensis ENSACAG00000008424 I
Afo_R007908 Aptenodytes forsteri Afo_R007908 I
ENSAMXG00000008651 Astyanax mexicanus ENSAMXG00000008651 I
ENSBTAP00000028574-D1 Bos grunniens ENSBTAP00000028574-D1 I
MAFF Bos taurus ENSBTAG00000021435 I
Brh_R009272 Buceros rhinoceros Brh_R009272 I
MAFF Callithrix jacchus ENSCJAG00000011992 I
Aan_R011585 Calypte anna Aan_R011585 I
MAFF Canis familiaris ENSCAFG00000029842 I
Cmyd_10007723 Chelonia mydas Cmyd_10007723 I
ENSCSAG00000006757 Chlorocebus sabaeus ENSCSAG00000006757 I
maff Danio rerio ENSDARG00000028957 I
Maff Dipodomys ordii ENSDORG00000013449 I
MAFF Echinops telfairi ENSETEG00000012984 I
ENSFALG00000012611 Ficedula albicollis ENSFALG00000012611 I
ENSGALG00000012277 Gallus gallus ENSGALG00000012277 I
mafgb Gasterosteus aculeatus ENSGACG00000019041 I
Gfo_R004700 Geospiza fortis Gfo_R004700 I
MAFF Gorilla gorilla ENSGGOG00000021932 I
MAFF Homo sapiens ENSG00000185022 D
ENSSTOG00000025460 Ictidomys tridecemlineatus ENSSTOG00000025460 I
ENSLACG00000007109 Latimeria chalumnae ENSLACG00000007109 I
MAFF Loxodonta africana ENSLAFG00000022547 I
ENSMMUP00000018288 Macaca fascicularis ENSMMUP00000018288 I
ENSMMUG00000013915 Macaca mulatta ENSMMUG00000013915 I
ENSMEUG00000002984 Macropus eugenii ENSMEUG00000002984 I
MAFF Meleagris gallopavo ENSMGAG00000015937 I
ENSMICG00000011572 Microcebus murinus ENSMICG00000011572 I
MAFF Monodelphis domestica ENSMODG00000018732 I
ENSMPUG00000013085 Mustela putorius furo ENSMPUG00000013085 I
Maff Mus musculus ENSMUSG00000042622 D
MAFF Myotis lucifugus ENSMLUG00000011358 I
ENSNLEG00000015068 Nomascus leucogenys ENSNLEG00000015068 I
Ogr11652 Ophisaurus gracilis Ogr11652 I
ENSONIG00000019674 Oreochromis niloticus ENSONIG00000019674 I
ENSONIG00000001329 Oreochromis niloticus ENSONIG00000001329 I
MAFF Oryctolagus cuniculus ENSOCUG00000006266 I
mafk Oryzias latipes ENSORLG00000004687 I
MAFG Oryzias latipes ENSORLG00000012170 I
MAFF Otolemur garnettii ENSOGAG00000027848 I
ENSOARG00000015236 Ovis aries ENSOARG00000015236 I
MAFF Pan troglodytes ENSPTRG00000029431 I
ENSPANG00000020550 Papio anubis ENSPANG00000020550 I
ENSPFOG00000002983 Poecilia formosa ENSPFOG00000002983 I
ENSPFOG00000005759 Poecilia formosa ENSPFOG00000005759 I
ENSPFOG00000012736 Poecilia formosa ENSPFOG00000012736 I
Pvit_08359 Pogona vitticeps Pvit_08359 I
ENSPPYG00000011816 Pongo abelii ENSPPYG00000011816 I
MAFF Procavia capensis ENSPCAG00000013370 I
MAFK Pteropus vampyrus ENSPVAG00000013872 I
Maff Rattus norvegicus ENSRNOG00000012886 I
MAFF Sus scrofa ENSSSCG00000030165 I
MAFF Taeniopygia guttata ENSTGUG00000010431 I
maff Takifugu rubripes ENSTRUG00000016981 I
mafk Takifugu rubripes ENSTRUG00000013716 I
mafk Tetraodon nigroviridis ENSTNIG00000004471 I
maff Tetraodon nigroviridis ENSTNIG00000001100 I
MAFF Tursiops truncatus ENSTTRG00000005618 I
ENSXMAG00000012964 Xiphophorus maculatus ENSXMAG00000012964 I
ENSXMAG00000009331 Xiphophorus maculatus ENSXMAG00000009331 I