CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mxi1
(
Tetraodon nigroviridis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTNIG00000010585
T037744_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mxi1
M08754_2.00
Mus musculus
VCACGTGBSNBBNNV
BNNVVNSVCACGTGB
Misc
Kulakovskiy et al.(2013)
MXI1_MOUSE.H11MO.0.A
0.879
0.942
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000000640
bHLH
86
139
HRSTHNELEKNSRRAPLRLCLERLKGLIPLGPDCTRHTTLGLLNKAKAHIKKLE
ENSTNIP00000013498
bHLH
68
121
HRSTHNELEKNSRRAPLRLCLERLKGLIPLGPDCTRHTTLGLLNKAKAHIKKLE
Links
Other
bHLH
family TFs
Other
Tetraodon nigroviridis
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000008017
Ailuropoda melanoleuca
ENSAMEG00000008017
I
0.000
ENSAMEG00000015664
Ailuropoda melanoleuca
ENSAMEG00000015664
I
0.000
Alligator_sinensis_CCG000418.1
Alligator sinensis
Alligator_sinensis_CCG000418.1
I
0.000
Alligator_sinensis_CCG007724.1
Alligator sinensis
Alligator_sinensis_CCG007724.1
I
0.000
ENSAPLG00000005866
Anas platyrhynchos
ENSAPLG00000005866
I
0.000
ENSAPLG00000007187
Anas platyrhynchos
ENSAPLG00000007187
I
0.000
ENSAPLG00000011493
Anas platyrhynchos
ENSAPLG00000011493
I
0.000
Afo_R002975
Aptenodytes forsteri
Afo_R002975
I
0.000
Afo_R006180
Aptenodytes forsteri
Afo_R006180
I
0.000
Afo_R010049
Aptenodytes forsteri
Afo_R010049
I
0.000
ENSAMXG00000000403
Astyanax mexicanus
ENSAMXG00000000403
I
0.000
ENSAMXG00000009363
Astyanax mexicanus
ENSAMXG00000009363
I
0.000
ENSAMXG00000014990
Astyanax mexicanus
ENSAMXG00000014990
I
0.000
ENSAMXG00000018669
Astyanax mexicanus
ENSAMXG00000018669
I
0.000
ENSBTAP00000021144-D1
Bos grunniens
ENSBTAP00000021144-D1
I
0.000
ENSBTAP00000028921-D1
Bos grunniens
ENSBTAP00000028921-D1
I
0.000
ENSP00000376461-D1
Bos grunniens
ENSP00000376461-D1
I
0.000
RORA
Bos taurus
ENSBTAG00000015904
I
0.000
RORC
Bos taurus
ENSBTAG00000017405
I
0.000
RORB
Bos taurus
ENSBTAG00000021699
I
0.000
gw.311.78.1
Branchiostoma floridae
gw.311.78.1
I
0.000
Brh_R003242
Buceros rhinoceros
Brh_R003242
I
0.000
Brh_R004006
Buceros rhinoceros
Brh_R004006
I
0.000
RORB
Callithrix jacchus
ENSCJAG00000001216
I
0.000
RORA
Callithrix jacchus
ENSCJAG00000003989
I
0.000
RORC
Callithrix jacchus
ENSCJAG00000008023
I
0.000
Aan_R009242
Calypte anna
Aan_R009242
I
0.000
Aan_R011707
Calypte anna
Aan_R011707
I
0.000
Aan_R015083
Calypte anna
Aan_R015083
I
0.000
RORB
Canis familiaris
ENSCAFG00000001769
I
0.000
RORA
Canis familiaris
ENSCAFG00000016700
I
0.000
RORA
Cavia porcellus
ENSCPOG00000008494
I
0.000
RORB
Cavia porcellus
ENSCPOG00000010612
I
0.000
Cmyd_10000975
Chelonia mydas
Cmyd_10000975
I
0.000
Cmyd_10006717
Chelonia mydas
Cmyd_10006717
I
0.000
ENSCSAG00000001825
Chlorocebus sabaeus
ENSCSAG00000001825
I
0.000
ENSCSAG00000008161
Chlorocebus sabaeus
ENSCSAG00000008161
I
0.000
ENSCSAG00000012081
Chlorocebus sabaeus
ENSCSAG00000012081
I
0.000
RORB
Choloepus hoffmanni
ENSCHOG00000009723
I
0.000
RORA
Choloepus hoffmanni
ENSCHOG00000011593
I
0.000
ENSCING00000002152
Ciona intestinalis
ENSCING00000002152
I
0.000
ENSCSAVG00000009992
Ciona savignyi
ENSCSAVG00000009992
I
0.000
rorab
Danio rerio
ENSDARG00000001910
I
0.000
rorcb
Danio rerio
ENSDARG00000017780
I
0.000
roraa
Danio rerio
ENSDARG00000031768
I
0.000
rorb
Danio rerio
ENSDARG00000033498
I
0.000
rorca
Danio rerio
ENSDARG00000057231
I
0.000
RORC
Dasypus novemcinctus
ENSDNOG00000033488
I
0.000
RORA
Dasypus novemcinctus
ENSDNOG00000043276
I
0.000
DILT_0001314401
Diphyllobothrium latum
DILT_0001314401
I
0.000
Rora
Dipodomys ordii
ENSDORG00000001826
I
0.000
Rorc
Dipodomys ordii
ENSDORG00000015326
I
0.000
RORA
Echinops telfairi
ENSETEG00000001493
I
0.000
RORB
Echinops telfairi
ENSETEG00000017457
I
0.000
RORC
Equus caballus
ENSECAG00000000918
I
0.000
RORA
Equus caballus
ENSECAG00000016384
I
0.000
RORB
Equus caballus
ENSECAG00000024312
I
0.000
RORB
Erinaceus europaeus
ENSEEUG00000014274
I
0.000
RORA
Erinaceus europaeus
ENSEEUG00000015809
I
0.000
RORB
Felis catus
ENSFCAG00000011421
I
0.000
RORA
Felis catus
ENSFCAG00000013642
I
0.000
ENSFALG00000012589
Ficedula albicollis
ENSFALG00000012589
I
0.000
ENSFALG00000012763
Ficedula albicollis
ENSFALG00000012763
I
0.000
ENSGMOG00000006930
Gadus morhua
ENSGMOG00000006930
I
0.000
ENSGMOG00000012277
Gadus morhua
ENSGMOG00000012277
I
0.000
ENSGALG00000001035
Gallus gallus
ENSGALG00000001035
I
0.000
RORA
Gallus gallus
ENSGALG00000003759
I
0.000
RORB
Gallus gallus
ENSGALG00000015150
I
0.000
roraa
Gasterosteus aculeatus
ENSGACG00000010672
I
0.000
rorb
Gasterosteus aculeatus
ENSGACG00000011556
I
0.000
rorca
Gasterosteus aculeatus
ENSGACG00000012280
I
0.000
rorcb
Gasterosteus aculeatus
ENSGACG00000015341
I
0.000
Gfo_R007588
Geospiza fortis
Gfo_R007588
I
0.000
Gfo_R008263
Geospiza fortis
Gfo_R008263
I
0.000
Gfo_R008829
Geospiza fortis
Gfo_R008829
I
0.000
RORA
Gorilla gorilla
ENSGGOG00000000541
I
0.000
RORC
Gorilla gorilla
ENSGGOG00000002223
I
0.000
RORB
Gorilla gorilla
ENSGGOG00000011970
I
0.000
RORA
Homo sapiens
ENSG00000069667
D
0.000
RORC
Homo sapiens
ENSG00000143365
D
0.000
RORB
Homo sapiens
ENSG00000198963
D
0.000
ENSSTOG00000012400
Ictidomys tridecemlineatus
ENSSTOG00000012400
I
0.000
ENSSTOG00000013264
Ictidomys tridecemlineatus
ENSSTOG00000013264
I
0.000
ENSSTOG00000019386
Ictidomys tridecemlineatus
ENSSTOG00000019386
I
0.000
ENSLACG00000006103
Latimeria chalumnae
ENSLACG00000006103
I
0.000
ENSLACG00000017448
Latimeria chalumnae
ENSLACG00000017448
I
0.000
ENSLOCG00000006502
Lepisosteus oculatus
ENSLOCG00000006502
I
0.000
ENSLOCG00000009712
Lepisosteus oculatus
ENSLOCG00000009712
I
0.000
ENSLOCG00000014779
Lepisosteus oculatus
ENSLOCG00000014779
I
0.000
RORA
Loxodonta africana
ENSLAFG00000000577
I
0.000
RORB
Loxodonta africana
ENSLAFG00000012757
I
0.000
RORC
Loxodonta africana
ENSLAFG00000020960
I
0.000
ENSP00000261523
Macaca fascicularis
ENSP00000261523
I
0.000
ENSP00000376461
Macaca fascicularis
ENSP00000376461
I
0.000
ENSP00000379507
Macaca fascicularis
ENSP00000379507
I
0.000
RORC
Macaca mulatta
ENSMMUG00000012138
I
0.000
RORB
Macaca mulatta
ENSMMUG00000012571
I
0.000
RORA
Macaca mulatta
ENSMMUG00000018192
I
0.000
ENSMEUG00000008146
Macropus eugenii
ENSMEUG00000008146
I
0.000
ENSMGAG00000002222
Meleagris gallopavo
ENSMGAG00000002222
I
0.000
RORA
Meleagris gallopavo
ENSMGAG00000004471
I
0.000
RORB
Microcebus murinus
ENSMICG00000007512
I
0.000
RORA
Microcebus murinus
ENSMICG00000010861
I
0.000
RORB
Monodelphis domestica
ENSMODG00000002046
I
0.000
ENSMODG00000004462
Monodelphis domestica
ENSMODG00000004462
I
0.000
RORA
Monodelphis domestica
ENSMODG00000011532
I
0.000
RORC
Monodelphis domestica
ENSMODG00000018911
I
0.000
ENSMPUG00000008883
Mustela putorius furo
ENSMPUG00000008883
I
0.000
Rorc
Mus musculus
ENSMUSG00000028150
D
0.000
Rora
Mus musculus
ENSMUSG00000032238
D
0.000
Rorb
Mus musculus
ENSMUSG00000036192
D
0.000
Myotis_brandtii_RORA_10029423
Myotis brandtii
Myotis_brandtii_RORA_10029423
I
0.000
Myotis_brandtii_RORB_10034418
Myotis brandtii
Myotis_brandtii_RORB_10034418
I
0.000
Myotis_brandtii_RORC_10008053
Myotis brandtii
Myotis_brandtii_RORC_10008053
I
0.000
RORA
Myotis lucifugus
ENSMLUG00000002493
I
0.000
RORB
Myotis lucifugus
ENSMLUG00000006436
I
0.000
RORC
Myotis lucifugus
ENSMLUG00000029229
I
0.000
ENSNLEG00000001398
Nomascus leucogenys
ENSNLEG00000001398
I
0.000
ENSNLEG00000010305
Nomascus leucogenys
ENSNLEG00000010305
I
0.000
ENSNLEG00000011865
Nomascus leucogenys
ENSNLEG00000011865
I
0.000
RORA
Ochotona princeps
ENSOPRG00000012364
I
0.000
RORB
Ochotona princeps
ENSOPRG00000016130
I
0.000
RORC
Ochotona princeps
ENSOPRG00000018310
I
0.000
Ogr03392
Ophisaurus gracilis
Ogr03392
I
0.000
ENSONIG00000004686
Oreochromis niloticus
ENSONIG00000004686
I
0.000
ENSONIG00000010247
Oreochromis niloticus
ENSONIG00000010247
I
0.000
ENSONIG00000010762
Oreochromis niloticus
ENSONIG00000010762
I
0.000
ENSONIG00000015289
Oreochromis niloticus
ENSONIG00000015289
I
0.000
ENSONIG00000015603
Oreochromis niloticus
ENSONIG00000015603
I
0.000
RORB
Ornithorhynchus anatinus
ENSOANG00000011655
I
0.000
RORA
Ornithorhynchus anatinus
ENSOANG00000012345
I
0.000
RORB
Oryctolagus cuniculus
ENSOCUG00000003732
I
0.000
RORA
Oryctolagus cuniculus
ENSOCUG00000012900
I
0.000
RORC
Oryctolagus cuniculus
ENSOCUG00000022907
I
0.000
rorca
Oryzias latipes
ENSORLG00000003765
I
0.000
roraa
Oryzias latipes
ENSORLG00000007645
I
0.000
rorb
Oryzias latipes
ENSORLG00000012441
I
0.000
RORB
Otolemur garnettii
ENSOGAG00000001523
I
0.000
RORA
Otolemur garnettii
ENSOGAG00000007357
I
0.000
RORC
Otolemur garnettii
ENSOGAG00000024385
I
0.000
ENSOARG00000012659
Ovis aries
ENSOARG00000012659
I
0.000
ENSOARG00000020816
Ovis aries
ENSOARG00000020816
I
0.000
ENSOARG00000021060
Ovis aries
ENSOARG00000021060
I
0.000
RORA
Pan troglodytes
ENSPTRG00000007134
I
0.000
RORB
Pan troglodytes
ENSPTRG00000021025
I
0.000
RORC
Pan troglodytes
ENSPTRG00000032436
I
0.000
ENSPANG00000017172
Papio anubis
ENSPANG00000017172
I
0.000
ENSPANG00000020758
Papio anubis
ENSPANG00000020758
I
0.000
ENSPANG00000024927
Papio anubis
ENSPANG00000024927
I
0.000
ENSPSIG00000005579
Pelodiscus sinensis
ENSPSIG00000005579
I
0.000
ENSPSIG00000011314
Pelodiscus sinensis
ENSPSIG00000011314
I
0.000
ENSPSIG00000016262
Pelodiscus sinensis
ENSPSIG00000016262
I
0.000
ENSPMAG00000009286
Petromyzon marinus
ENSPMAG00000009286
I
0.000
ENSPFOG00000000838
Poecilia formosa
ENSPFOG00000000838
I
0.000
ENSPFOG00000003699
Poecilia formosa
ENSPFOG00000003699
I
0.000
ENSPFOG00000012359
Poecilia formosa
ENSPFOG00000012359
I
0.000
ENSPFOG00000015704
Poecilia formosa
ENSPFOG00000015704
I
0.000
ENSPFOG00000017745
Poecilia formosa
ENSPFOG00000017745
I
0.000
Pvit_09819
Pogona vitticeps
Pvit_09819
I
0.000
Pvit_12494
Pogona vitticeps
Pvit_12494
I
0.000
Pvit_17369
Pogona vitticeps
Pvit_17369
I
0.000
Pvit_17370
Pogona vitticeps
Pvit_17370
I
0.000
ENSPPYG00000000853
Pongo abelii
ENSPPYG00000000853
I
0.000
ENSPPYG00000006528
Pongo abelii
ENSPPYG00000006528
I
0.000
ENSPPYG00000019294
Pongo abelii
ENSPPYG00000019294
I
0.000
RORC
Procavia capensis
ENSPCAG00000005628
I
0.000
RORA
Procavia capensis
ENSPCAG00000006566
I
0.000
RORB
Procavia capensis
ENSPCAG00000012274
I
0.000
RORB
Pteropus vampyrus
ENSPVAG00000007216
I
0.000
RORC
Pteropus vampyrus
ENSPVAG00000008917
I
0.000
RORA
Pteropus vampyrus
ENSPVAG00000011408
I
0.000
Rorb
Rattus norvegicus
ENSRNOG00000013413
I
0.000
Rorc
Rattus norvegicus
ENSRNOG00000020836
I
0.000
Rora
Rattus norvegicus
ENSRNOG00000027145
I
0.000
ENSSHAG00000002191
Sarcophilus harrisii
ENSSHAG00000002191
I
0.000
ENSSHAG00000015734
Sarcophilus harrisii
ENSSHAG00000015734
I
0.000
ENSSHAG00000015984
Sarcophilus harrisii
ENSSHAG00000015984
I
0.000
ENSSHAG00000018693
Sarcophilus harrisii
ENSSHAG00000018693
I
0.000
SSLN_0000693201
Schistocephalus solidus
SSLN_0000693201
I
0.000
SPER_0002219401
Spirometra erinaceieuropaei
SPER_0002219401
I
0.000
RORA
Sus scrofa
ENSSSCG00000004576
I
0.000
RORB
Sus scrofa
ENSSSCG00000005268
I
0.000
RORC
Sus scrofa
ENSSSCG00000026427
I
0.000
ENSTGUG00000000264
Taeniopygia guttata
ENSTGUG00000000264
I
0.000
RORB
Taeniopygia guttata
ENSTGUG00000000785
I
0.000
RORA
Taeniopygia guttata
ENSTGUG00000005333
I
0.000
ENSTRUG00000002901
Takifugu rubripes
ENSTRUG00000002901
I
0.000
rorca
Takifugu rubripes
ENSTRUG00000003189
I
0.000
rorcb
Takifugu rubripes
ENSTRUG00000005569
I
0.000
roraa
Takifugu rubripes
ENSTRUG00000010553
I
0.000
ENSTSYG00000001170
Tarsius syrichta
ENSTSYG00000001170
I
0.000
ENSTSYG00000007907
Tarsius syrichta
ENSTSYG00000007907
I
0.000
ENSTSYG00000010455
Tarsius syrichta
ENSTSYG00000010455
I
0.000
roraa
Tetraodon nigroviridis
ENSTNIG00000008390
I
0.000
rorb
Tetraodon nigroviridis
ENSTNIG00000014682
D
0.000
rorcb
Tetraodon nigroviridis
ENSTNIG00000015337
I
0.000
RORA
Tupaia belangeri
ENSTBEG00000003065
I
0.000
RORB
Tupaia belangeri
ENSTBEG00000010761
I
0.000
RORC
Tursiops truncatus
ENSTTRG00000003151
I
0.000
RORA
Tursiops truncatus
ENSTTRG00000007718
I
0.000
Tal_R010110
Tyto alba
Tal_R010110
I
0.000
RORB
Vicugna pacos
ENSVPAG00000003390
I
0.000
RORA
Vicugna pacos
ENSVPAG00000007893
I
0.000
rora
Xenopus tropicalis
XB-GENE-478535
I
0.000
rorb
Xenopus tropicalis
XB-GENE-484846
I
0.000
XP_002937524
Xenopus tropicalis
XP_002937524
I
0.000
ENSXMAG00000003228
Xiphophorus maculatus
ENSXMAG00000003228
I
0.000
ENSXMAG00000015567
Xiphophorus maculatus
ENSXMAG00000015567
I
0.000
ENSXMAG00000018442
Xiphophorus maculatus
ENSXMAG00000018442
I
0.000
ENSXMAG00000019296
Xiphophorus maculatus
ENSXMAG00000019296
I
0.000