OLIG3 (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000017004 T037789_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Olig3
M01745_2.00 		Mus musculus
NWAHHATANNN
NNNTATDDTWN		 PBM
Weirauch et al.(2014)
pTH5164 		0.890 0.982
OLIG3
M02798_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG3_1 		0.890 0.982
OLIG3
M04175_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_HT-SELEX 		0.890 0.982
OLIG3
M04171_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_1 		0.890 0.982
OLIG3
M04172_2.00 		Homo sapiens
AACAKMTGBT
AVCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_2 		0.890 0.982
OLIG3
M04176_2.00 		Homo sapiens
RMCATATGGY
RCCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_Methyl-HT-SELEX 		0.890 0.982
OLIG3
M04173_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_1 		0.890 0.982
OLIG3
M04174_2.00 		Homo sapiens
VACAKMTGKY
RMCAKMTGTB		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_2 		0.890 0.982
OLIG2
M02812_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_1 		0.870 0.945
OLIG2
M02813_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_2 		0.870 0.945
OLIG2
M04223_2.00 		Homo sapiens
AACAKMTGTB
VACAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_1 		0.870 0.945
OLIG2
M04224_2.00 		Homo sapiens
AMCATATGKY
RMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_2 		0.870 0.945
OLIG2
M08742_2.00 		Homo sapiens
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_HUMAN.H11MO.0.B 		0.870 0.945
Olig2
M08771_2.00 		Mus musculus
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_MOUSE.H11MO.0.A 		0.870 0.945
Olig2
M09477_2.00 		Mus musculus
RVCAKMTGKH
DMCAKMTGBY		 Misc
Heinz et al.(2010)
Neuron-Olig2_GSE30882 		0.870 0.945
OLIG2
M04225_2.00 		Homo sapiens
AACAKMTGKB
VMCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_1 		0.870 0.945
OLIG2
M04226_2.00 		Homo sapiens
AMCATATGKT
AMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_2 		0.870 0.945
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000020129 bHLH 82 136

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB02276.1 Alternaria brassicicola AB02276.1 N
M437DRAFT_71311 Aureobasidium melanogenum M437DRAFT_71311 N
M438DRAFT_321969 Aureobasidium pullulans M438DRAFT_321969 N
AUEXF2481DRAFT_6643 Aureobasidium subglaciale AUEXF2481DRAFT_6643 N
BAUCODRAFT_154260 Baudoinia compniacensis BAUCODRAFT_154260 N
COCC4DRAFT_41720 Bipolaris maydis COCC4DRAFT_41720 N
COCMIDRAFT_1594 Bipolaris oryzae COCMIDRAFT_1594 N
COCVIDRAFT_22390 Bipolaris victoriae COCVIDRAFT_22390 N
COCCADRAFT_80576 Bipolaris zeicola COCCADRAFT_80576 N
estExt_Genewise1Plus.C_100663 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_100663 N
DOTSEDRAFT_74621 Dothistroma septosporum DOTSEDRAFT_74621 N
MPH_12259 Macrophomina phaseolina MPH_12259 N
estExt_Genewise1.C_380045 Mycosphaerella fijiensis estExt_Genewise1.C_380045 N
fgenesh1_pm.C_chr_11000085 Mycosphaerella graminicola fgenesh1_pm.C_chr_11000085 N
UCRNP2_5080 Neofusicoccum parvum UCRNP2_5080 N
MYCFIDRAFT_216849 Pseudocercospora fijiensis MYCFIDRAFT_216849 N
PTRG_03318 Pyrenophora triticirepentis PTRG_03318 N
SETTUDRAFT_37312 Setosphaeria turcica SETTUDRAFT_37312 N
SNOG_11987 Stagonospora nodorum SNOG_11987 N
PV09_07639 Verruconis gallopava PV09_07639 N
Mycgr3G87993 Zymoseptoria tritici Mycgr3G87993 N