FERD3L (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000017777 T037795_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FERD3L
M04140_2.00 		Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1 		0.852 0.904
FERD3L
M04141_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2 		0.852 0.904
FERD3L
M04142_2.00 		Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1 		0.852 0.904
FERD3L
M04143_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2 		0.852 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000020929 bHLH 70 122

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000017744 Chlorocebus sabaeus ENSCSAG00000017744 N
ZNF772 Homo sapiens ENSG00000197128 N
ENSP00000341165 Macaca fascicularis ENSP00000341165 N
ZNF772 Macaca mulatta ENSMMUG00000014285 N
ENSNLEG00000010960 Nomascus leucogenys ENSNLEG00000010960 N
ZNF772 Otolemur garnettii ENSOGAG00000028080 N
ZNF772 Pan troglodytes ENSPTRG00000023014 N
ENSPANG00000015372 Papio anubis ENSPANG00000015372 N