tcf21 (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000003919 T037832_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.914 1.000
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.914 1.000
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.914 1.000
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.914 1.000
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.914 0.981
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.914 0.981
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.914 0.981
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.914 0.981
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.914 0.981
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.914 0.981
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.914 0.981
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.914 0.981
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.914 0.981
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000009251 bHLH 69 121

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_01536 Aspergillus nidulans CADANIAG00008163 D
CADANGAG00013191 Aspergillus niger CADANGAG00013191 I
ATEG_04779 Aspergillus terreus CADATEAG00007874 I
PVAR5_2855 Byssochlamys spectabilis PVAR5_2855 I
CHGG_05948 Chaetomium globosum CHGG_05948 I
CTHT_0003390 Chaetomium thermophilum CTHT_0003390 I
CFIO01_10230 Colletotrichum fioriniae CFIO01_10230 I
Cob_12403 Colletotrichum orbiculare Cob_12403 I
fgenesh1_pg.C_scaffold_5000767 Cryphonectria parasitica fgenesh1_pg.C_scaffold_5000767 I
FFUJ_01033 Fusarium fujikuroi FFUJ_01033 I
FOXG_00543 Fusarium oxysporum FOXG_00543 I
FVEG_00971 Fusarium verticillioides FVEG_00971 I
MYCTH_2297012 Myceliophthora thermophila MYCTH_2297012 I
ada-1 Neurospora crassa NCU00499 D
estExt_fgenesh3_kg.C_40162 Neurospora discreta estExt_fgenesh3_kg.C_40162 I
NEUTE1DRAFT_119203 Neurospora tetrasperma NEUTE1DRAFT_119203 I
PMAA_009160 Penicillium marneffei PMAA_009160 I
PDE_06458 Penicillium oxalicum PDE_06458 I
PFICI_01318 Pestalotiopsis fici PFICI_01318 I
SPBR_06799 Sporothrix brasiliensis SPBR_06799 I
HMPREF1624_07612 Sporothrix schenckii HMPREF1624_07612 I
PMAA_009160 Talaromyces marneffei PMAA_009160 I
TSTA_058790 Talaromyces stipitatus TSTA_058790 I
THITE_2112457 Thielavia terrestris THITE_2112457 I
TRIATDRAFT_182347 Trichoderma atroviride TRIATDRAFT_182347 I
TRIREDRAFT_73654 Trichoderma reesei TRIREDRAFT_73654 I
TRIVIDRAFT_212339 Trichoderma virens TRIVIDRAFT_212339 I
UV8b_4299 Ustilaginoidea virens UV8b_4299 I