CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GJ16254
(
Drosophila virilis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
FBgn0203439
T038910_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
crp
M03595_2.00
Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT
SELEX
Nitta et al.(2015)
crp_1
0.914
0.981
crp
M05937_2.00
Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB
B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994
0.914
0.981
hlh-11
M00931_2.00
Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT
PBM
Grove et al.(2009)
HLH11
0.879
0.750
Tfap4
M01717_2.00
Mus musculus
VHCABVYGB
VCRBVTGDB
PBM
Weirauch et al.(2014)
pTH5067
0.843
0.788
TFAP4
M02776_2.00
Homo sapiens
AWCAGCTGWY
RWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_1
0.843
0.788
TFAP4
M02777_2.00
Homo sapiens
AWCAGCTGWT
AWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_2
0.843
0.788
TFAP4
M04066_2.00
Homo sapiens
VHCAKVTGDB
VHCABMTGDB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1
0.843
0.788
TFAP4
M04067_2.00
Homo sapiens
VWCAGCTGWB
VWCAGCTGWB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2
0.843
0.788
TFAP4
M04070_2.00
Homo sapiens
RHCAYVTGDB
VHCABRTGDY
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1
0.843
0.788
TFAP4
M04071_2.00
Homo sapiens
VHCAGCTGDB
VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2
0.843
0.788
TFAP4
M08712_2.00
Homo sapiens
VMNCAGCTGR
YCAGCTGNKB
Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A
0.843
0.788
TFAP4
M09453_2.00
Homo sapiens
NVHCAGCTGD
HCAGCTGDBN
Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738
0.843
0.788
TFAP4
M09802_2.00
Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK
Transfac
Matys et al.(2006)
V$AP4_01
0.843
0.788
TFAP4
M09803_2.00
Homo sapiens
NNSAGCTGHB
VDCAGCTSNN
Transfac
Matys et al.(2006)
V$AP4_Q5
0.843
0.788
TFAP4
M09804_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_01
0.843
0.788
TFAP4
M09805_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_02
0.843
0.788
TFAP4
M09806_2.00
Homo sapiens
NVCAGCTGHB
VDCAGCTGBN
Transfac
Matys et al.(2006)
V$AP4_Q6
0.843
0.788
TFAP4
M04068_2.00
Homo sapiens
DHCABMTGDN
NHCAKVTGDH
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1
0.843
0.788
TFAP4
M04069_2.00
Homo sapiens
AWCAGCTGWT
AWCAGCTGWT
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2
0.843
0.788
TFAP4
M04072_2.00
Homo sapiens
VHCABVTGDB
VHCABVTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1
0.843
0.788
TFAP4
M04073_2.00
Homo sapiens
VHCAGCTGDB
VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2
0.843
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0230671
bHLH
102
153
RREIANSNERRRMQSINAGFQNLRSLLPRHEGEKLSKAAILQQTFQYIVELE
Links
Other
bHLH
family TFs
Other
Drosophila virilis
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_00440
Arthroderma benhamiae
ARB_00440
I
e_gw1.00083.362.1
Aspergillus carbonarius
e_gw1.00083.362.1
I
ACLA_025830
Aspergillus clavatus
CADACLAG00002824
I
CADAFLAG00004009
Aspergillus flavus
CADAFLAG00004009
I
AFUA_1G09670
Aspergillus fumigatus
CADAFUAG00007221
I
ANIA_01298
Aspergillus nidulans
CADANIAG00001319
D
CADANGAG00006457
Aspergillus niger
CADANGAG00006457
I
EURHEDRAFT_415231
Aspergillus ruber
EURHEDRAFT_415231
I
ATEG_04204
Aspergillus terreus
CADATEAG00009987
I
BDDG_06829
Blastomyces dermatitidis
BDDG_06829
I
PVAR5_5311
Byssochlamys spectabilis
PVAR5_5311
I
A1O1_06603
Capronia coronata
A1O1_06603
I
A1O3_05723
Capronia epimyces
A1O3_05723
I
PV04_06676
Capronia semiimmersa
PV04_06676
I
Z519_03796
Cladophialophora bantiana
Z519_03796
I
G647_06262
Cladophialophora carrionii
G647_06262
I
PV07_03563
Cladophialophora immunda
PV07_03563
I
A1O5_08857
Cladophialophora psammophila
A1O5_08857
I
A1O7_06270
Cladophialophora yegresii
A1O7_06270
I
CIMG_10254
Coccidioides immitis
CIMG_10254
I
CPC735_013440
Coccidioides posadasii
CPC735_013440
I
EPUS_06221
Endocarpon pusillum
EPUS_06221
I
A1O9_10773
Exophiala aquamarina
A1O9_10773
I
HMPREF1120_04164
Exophiala dermatitidis
HMPREF1120_04164
I
PV06_10058
Exophiala oligosperma
PV06_10058
I
PV11_07531
Exophiala sideris
PV11_07531
I
PV08_08114
Exophiala spinifera
PV08_08114
I
PV05_08012
Exophiala xenobiotica
PV05_08012
I
Z517_01133
Fonsecaea pedrosoi
Z517_01133
I
CMQ_1019
Grosmannia clavigera
CMQ_1019
N
HCBG_03326
Histoplasma capsulatum
HCBG_03326
I
LEMA_P050050.1
Leptosphaeria maculans
LEMA_P050050.1
I
MCYG_06262
Microsporum canis
MCYG_06262
I
MGYG_06696
Microsporum gypseum
MGYG_06696
I
NFIA_015940
Neosartorya fischeri
CADNFIAG00000638
I
F503_06966
Ophiostoma piceae uamh
F503_06966
N
PABG_03267
Paracoccidioides brasiliensis
PABG_03267
I
PAAG_02798
Paracoccidioides sp lutzii
PAAG_02798
I
Pc16g06560
Penicillium chrysogenum
Pc16g06560
I
PDIP_40460
Penicillium digitatum
PDIP_40460
I
PEX1_052970
Penicillium expansum
PEX1_052970
I
PITC_023420
Penicillium italicum
PITC_023420
I
PMAA_025110
Penicillium marneffei
PMAA_025110
I
PDE_07053
Penicillium oxalicum
PDE_07053
I
PCH_Pc16g06560
Penicillium rubens
PCH_Pc16g06560
I
U727_0043047031
Penicillium solitum
U727_0043047031
I
SNOG_15057
Phaeosphaeria nodorum
SNOG_15057
I
PODANS_1_13720
Podospora anserina
PODANS_1_13720
N
Z518_05851
Rhinocladiella mackenziei
Z518_05851
I
SPBR_02720
Sporothrix brasiliensis
SPBR_02720
N
HMPREF1624_02502
Sporothrix schenckii
HMPREF1624_02502
N
SNOG_15057
Stagonospora nodorum
SNOG_15057
I
PMAA_025110
Talaromyces marneffei
PMAA_025110
I
TSTA_073940
Talaromyces stipitatus
TSTA_073940
I
H102_01702
Trichophyton rubrum
H102_01702
I
H105_01718
Trichophyton soudanense
H105_01718
I
TESG_07003
Trichophyton tonsurans
TESG_07003
I
TRV_02680
Trichophyton verrucosum
TRV_02680
I
GSTUM_00003292001
Tuber melanosporum
GSTUM_00003292001
I
UREG_03477
Uncinocarpus reesii
UREG_03477
I