bHLH34 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh2_kg.3__2536__AT3G23210.1 T039124_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH34
M01704_2.00 		Arabidopsis thaliana
VCACGYGH
DCRCGTGB		 PBM
Weirauch et al.(2014)
pTH7212 		0.914 0.980
BHLH34
M06734_2.00 		Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN
NGDCACGTGBNNNNHNNDNNN		 Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a 		0.914 0.980
BHLH34
M06735_2.00 		Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN
NNNNNNNNVCACGTGNNNNNYWY		 Dap-seq
OMalley et al.(2016)
bHLH34_col 		0.914 0.980
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__2536__AT3G23210.1 bHLH 162 212

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh2_pg.C_960136 Branchiostoma floridae estExt_fgenesh2_pg.C_960136 N
fgenesh2_pg.scaffold_72000003 Branchiostoma floridae fgenesh2_pg.scaffold_72000003 N
fgenesh2_pg.scaffold_624000032 Branchiostoma floridae fgenesh2_pg.scaffold_624000032 N
fgenesh2_pg.scaffold_58000023 Branchiostoma floridae fgenesh2_pg.scaffold_58000023 N
fgenesh2_pg.scaffold_55000124 Branchiostoma floridae fgenesh2_pg.scaffold_55000124 N
fgenesh2_pg.scaffold_55000119 Branchiostoma floridae fgenesh2_pg.scaffold_55000119 N
fgenesh2_pg.scaffold_440000023 Branchiostoma floridae fgenesh2_pg.scaffold_440000023 N
fgenesh2_pg.scaffold_354000015 Branchiostoma floridae fgenesh2_pg.scaffold_354000015 N
fgenesh2_pg.scaffold_354000013 Branchiostoma floridae fgenesh2_pg.scaffold_354000013 N
fgenesh2_pg.scaffold_32000086 Branchiostoma floridae fgenesh2_pg.scaffold_32000086 N
fgenesh2_pg.scaffold_32000031 Branchiostoma floridae fgenesh2_pg.scaffold_32000031 N
fgenesh2_pg.scaffold_308000052 Branchiostoma floridae fgenesh2_pg.scaffold_308000052 N
fgenesh2_pg.scaffold_268000051 Branchiostoma floridae fgenesh2_pg.scaffold_268000051 N
fgenesh2_pg.scaffold_1639000001 Branchiostoma floridae fgenesh2_pg.scaffold_1639000001 N
estExt_fgenesh2_pg.C_10050001 Branchiostoma floridae estExt_fgenesh2_pg.C_10050001 N
estExt_fgenesh2_pg.C_750143 Branchiostoma floridae estExt_fgenesh2_pg.C_750143 N
estExt_fgenesh2_pg.C_7360007 Branchiostoma floridae estExt_fgenesh2_pg.C_7360007 N
estExt_fgenesh2_pg.C_7160018 Branchiostoma floridae estExt_fgenesh2_pg.C_7160018 N
estExt_fgenesh2_pg.C_5860001 Branchiostoma floridae estExt_fgenesh2_pg.C_5860001 N
estExt_fgenesh2_pg.C_5580012 Branchiostoma floridae estExt_fgenesh2_pg.C_5580012 N
estExt_fgenesh2_pg.C_520015 Branchiostoma floridae estExt_fgenesh2_pg.C_520015 N
estExt_fgenesh2_pg.C_460129 Branchiostoma floridae estExt_fgenesh2_pg.C_460129 N
estExt_fgenesh2_pg.C_2150032 Branchiostoma floridae estExt_fgenesh2_pg.C_2150032 N
estExt_fgenesh2_pg.C_160025 Branchiostoma floridae estExt_fgenesh2_pg.C_160025 N
estExt_fgenesh2_pg.C_1010105 Branchiostoma floridae estExt_fgenesh2_pg.C_1010105 N
estExt_fgenesh2_pg.C_10050003 Branchiostoma floridae estExt_fgenesh2_pg.C_10050003 N
estExt_fgenesh2_pg.C_10050002 Branchiostoma floridae estExt_fgenesh2_pg.C_10050002 N