fgenesh2_kg.3__3440__AT2G18300.2 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh2_kg.3__3440__AT2G18300.2 T039127_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.914 1.000
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.914 1.000
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.914 0.960
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.864 0.840
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.864 0.820
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.864 0.820
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.852 0.800
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.852 0.800
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.852 0.760
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.852 0.760
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.851 0.800
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.851 0.800
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.839 0.700
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__3440__AT2G18300.2 bHLH 193 242

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

729 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001186 Ailuropoda melanoleuca ENSAMEG00000001186 I 0.000
Alligator_sinensis_CCG001426.1 Alligator sinensis Alligator_sinensis_CCG001426.1 I 0.000
ENSAPLG00000016056 Anas platyrhynchos ENSAPLG00000016056 I 0.000
MTF1 Anolis carolinensis ENSACAG00000017181 I 0.000
Afo_R013895 Aptenodytes forsteri Afo_R013895 I 0.000
ENSAMXG00000001644 Astyanax mexicanus ENSAMXG00000001644 I 0.000
ENSBTAP00000008535-D1 Bos grunniens ENSBTAP00000008535-D1 I 0.000
MTF1 Bos taurus ENSBTAG00000006511 I 0.000
Brh_R010359 Buceros rhinoceros Brh_R010359 I 0.000
MTF1 Callithrix jacchus ENSCJAG00000002097 I 0.000
Aan_R005906 Calypte anna Aan_R005906 I 0.000
MTF1 Canis familiaris ENSCAFG00000003247 I 0.000
MTF1 Cavia porcellus ENSCPOG00000014657 I 0.000
Cmyd_10015325 Chelonia mydas Cmyd_10015325 I 0.000
ENSCSAG00000001118 Chlorocebus sabaeus ENSCSAG00000001118 I 0.000
MTF1 Dasypus novemcinctus ENSDNOG00000009118 I 0.000
MTF1 Echinops telfairi ENSETEG00000003045 I 0.000
MTF1 Equus caballus ENSECAG00000017235 I 0.000
MTF1 Felis catus ENSFCAG00000011020 I 0.000
ENSFALG00000000973 Ficedula albicollis ENSFALG00000000973 I 0.000
ENSGMOG00000015592 Gadus morhua ENSGMOG00000015592 I 0.000
MTF1 Gallus gallus ENSGALG00000001639 I 0.000
MTF1 Gasterosteus aculeatus ENSGACG00000013875 I 0.000
Gfo_R001683 Geospiza fortis Gfo_R001683 I 0.000
MTF1 Gorilla gorilla ENSGGOG00000007624 I 0.000
MTF1 Homo sapiens ENSG00000188786 D 0.000
ENSSTOG00000025276 Ictidomys tridecemlineatus ENSSTOG00000025276 I 0.000
ENSLOCG00000003310 Lepisosteus oculatus ENSLOCG00000003310 I 0.000
ENSP00000362127 Macaca fascicularis ENSP00000362127 I 0.000
MTF1 Macaca mulatta ENSMMUG00000023275 I 0.000
MTF1 Meleagris gallopavo ENSMGAG00000003052 I 0.000
MTF1 Microcebus murinus ENSMICG00000011969 I 0.000
MTF1 Monodelphis domestica ENSMODG00000017745 I 0.000
ENSMPUG00000014538 Mustela putorius furo ENSMPUG00000014538 I 0.000
Mtf1 Mus musculus ENSMUSG00000028890 D 0.000
Myotis_brandtii_MTF1_10028927 Myotis brandtii Myotis_brandtii_MTF1_10028927 I 0.000
MTF1 Myotis lucifugus ENSMLUG00000000963 I 0.000
ENSNLEG00000011682 Nomascus leucogenys ENSNLEG00000011682 I 0.000
Ogr09934 Ophisaurus gracilis Ogr09934 I 0.000
ENSONIG00000016218 Oreochromis niloticus ENSONIG00000016218 I 0.000
MTF1 Ornithorhynchus anatinus ENSOANG00000002047 I 0.000
MTF1 Oryctolagus cuniculus ENSOCUG00000005389 I 0.000
MTF1 Oryzias latipes ENSORLG00000014411 I 0.000
MTF1 Otolemur garnettii ENSOGAG00000000872 I 0.000
ENSOARG00000019896 Ovis aries ENSOARG00000019896 I 0.000
MTF1 Pan troglodytes ENSPTRG00000022932 I 0.000
ENSPANG00000016211 Papio anubis ENSPANG00000016211 I 0.000
ENSPSIG00000005687 Pelodiscus sinensis ENSPSIG00000005687 I 0.000
ENSPFOG00000013962 Poecilia formosa ENSPFOG00000013962 I 0.000
Pvit_17763 Pogona vitticeps Pvit_17763 I 0.000
ENSPPYG00000001521 Pongo abelii ENSPPYG00000001521 I 0.000
MTF1 Pteropus vampyrus ENSPVAG00000010152 I 0.000
LOC100909856 Rattus norvegicus ENSRNOG00000050240 I 0.000
Mtf1 Rattus norvegicus ENSRNOG00000025724 I 0.000
Sakowv30031703m.g Saccoglossus kowalevskii Sakowv30031703m.g I 0.000
ENSSHAG00000014007 Sarcophilus harrisii ENSSHAG00000014007 I 0.000
MTF1 Takifugu rubripes ENSTRUG00000005297 I 0.000
ENSTSYG00000005589 Tarsius syrichta ENSTSYG00000005589 I 0.000
tetur01g09970 Tetranychus urticae tetur01g09970 I 0.000
MTF1 Tursiops truncatus ENSTTRG00000013535 I 0.000
Tal_R009432 Tyto alba Tal_R009432 I 0.000
mtf1.L Xenopus laevis XB-GENE-979131 I 0.000
mtf1 Xenopus tropicalis XB-GENE-979128 I 0.000
ENSXMAG00000014614 Xiphophorus maculatus ENSXMAG00000014614 I 0.000