CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G085467
(
Zea mays
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GRMZM2G085467
T039866_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.902
0.902
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.902
0.902
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN
NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.879
0.961
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G085467_P02
bHLH
332
382
ATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQ
Links
Other
bHLH
family TFs
Other
Zea mays
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
H311_03925
Anncaliia algerae
H311_03925
N
CHGG_08967
Chaetomium globosum
CHGG_08967
N
CLEC006115
Cimex lectularius
CLEC006115
N
ENSFCAG00000028664
Felis catus
ENSFCAG00000028664
N
TBP
Homo sapiens
ENSG00000112592
D
Sjc_0032420
Schistosoma japonicum
Sjc_0032420
N
VDBG_08116
Verticillium albo atrum
VDBG_08116
N
VDBG_08116
Verticillium alfalfae
VDBG_08116
N