CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM5G818643
(
Zea mays
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GRMZM5G818643
T039977_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.914
0.941
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC
GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.914
0.902
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH
DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.902
0.922
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.902
0.902
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY
RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.902
0.902
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.902
0.882
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC
GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.888
0.902
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN
NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.875
0.843
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.875
0.843
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.864
0.804
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.864
0.784
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT
ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.864
0.784
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN
NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.842
0.784
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM5G818643_P01
bHLH
260
310
ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQ
GRMZM5G818643_P02
bHLH
260
306
ATNSHSLAERLRREKISERMKLLQDLVPGCSKVGLSSTQKKEKGNRT
Links
Other
bHLH
family TFs
Other
Zea mays
TFs
901 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL008958
Aedes aegypti
AAEL008958
I
0.000
Aqu1.223978
Amphimedon queenslandica
Aqu1.223978
I
0.000
AALB006374
Anopheles albimanus
AALB006374
I
0.000
AATE005236
Anopheles atroparvus
AATE005236
I
0.000
ACHR003325
Anopheles christyi
ACHR003325
I
0.000
ACUA002943
Anopheles culicifacies
ACUA002943
I
0.000
ADAC001846
Anopheles darlingi
ADAC001846
I
0.000
ADIR009268
Anopheles dirus
ADIR009268
I
0.000
AFAF011451
Anopheles farauti
AFAF011451
I
0.000
AFUN010432
Anopheles funestus
AFUN010432
I
0.000
AGAP000662
Anopheles gambiae
AGAP000662
I
0.000
AMEM001535
Anopheles merus
AMEM001535
I
0.000
AMIN005769
Anopheles minimus
AMIN005769
I
0.000
AQUA005742
Anopheles quadriannulatus
AQUA005742
I
0.000
ASIS017558
Anopheles sinensis
ASIS017558
I
0.000
ASTEI07780
Anopheles stephensi
ASTEI07780
I
0.000
ARB_07826
Arthroderma benhamiae
ARB_07826
I
0.000
MCYG_01013
Arthroderma otae
MCYG_01013
I
0.000
AGOS_AER369C
Ashbya gossypii
AGOS_AER369C
I
0.000
fgenesh1_pm.00866_#_484
Aspergillus carbonarius
fgenesh1_pm.00866_#_484
I
0.000
ACLA_039840
Aspergillus clavatus
CADACLAG00004044
I
0.000
CADAFLAG00002435
Aspergillus flavus
CADAFLAG00002435
I
0.000
AFUA_3G11960
Aspergillus fumigatus
CADAFUAG00005312
I
0.000
ANIA_02854
Aspergillus nidulans
CADANIAG00010236
I
0.000
CADANGAG00002306
Aspergillus niger
CADANGAG00002306
I
0.000
CADAORAG00001350
Aspergillus oryzae
CADAORAG00001350
I
0.000
EURHEDRAFT_84089
Aspergillus ruber
EURHEDRAFT_84089
I
0.000
ATEG_04739
Aspergillus terreus
CADATEAG00006672
I
0.000
ENSAMXG00000015869
Astyanax mexicanus
ENSAMXG00000015869
I
0.000
BDDG_09123
Blastomyces dermatitidis
BDDG_09123
I
0.000
fgenesh2_pg.scaffold_167000105
Branchiostoma floridae
fgenesh2_pg.scaffold_167000105
I
0.000
PVAR5_5344
Byssochlamys spectabilis
PVAR5_5344
I
0.000
CaO19.12844
Candida albicans
CaO19.12844
I
0.000
CaO19.5389
Candida albicans
CaO19.5389
I
0.000
CD36_80620
Candida dubliniensis
CD36_80620
I
0.000
CAGL0J10120g
Candida glabrata
CAGL0J10120g
I
0.000
PGUG_02044
Candida guilliermondii
PGUG_02044
I
0.000
CLUG_01333
Candida lusitaniae
CLUG_01333
I
0.000
G210_3526
Candida maltosa
G210_3526
I
0.000
CORT_0D07370
Candida orthopsilosis
CORT_0D07370
I
0.000
CPAG_03572
Candida parapsilosis
CPAG_03572
I
0.000
CANTEDRAFT_130674
Candida tenuis
CANTEDRAFT_130674
I
0.000
CTRG_05718
Candida tropicalis
CTRG_05718
I
0.000
A1O1_05934
Capronia coronata
A1O1_05934
I
0.000
A1O3_01051
Capronia epimyces
A1O3_01051
I
0.000
CHGG_03006
Chaetomium globosum
CHGG_03006
I
0.000
CLEC005770
Cimex lectularius
CLEC005770
I
0.000
Z519_10766
Cladophialophora bantiana
Z519_10766
I
0.000
PV07_01813
Cladophialophora immunda
PV07_01813
I
0.000
A1O5_06245
Cladophialophora psammophila
A1O5_06245
I
0.000
CLUG_01333
Clavispora lusitaniae
CLUG_01333
I
0.000
CIMG_03727
Coccidioides immitis
CIMG_03727
I
0.000
CPC735_005630
Coccidioides posadasii
CPC735_005630
I
0.000
CpipJ_CPIJ003766
Culex pipiens
CpipJ_CPIJ003766
I
0.000
CPIJ003766
Culex quinquefasciatus
CPIJ003766
I
0.000
HMPREF1541_00364
Cyphellophora europaea
HMPREF1541_00364
I
0.000
foxj2
Danio rerio
ENSDARG00000057680
I
0.000
DAPPUDRAFT_332896
Daphnia pulex
DAPPUDRAFT_332896
I
0.000
DEHA2A08910g
Debaryomyces hansenii
DEHA2A08910g
I
0.000
DRE_01381
Drechslerella stenobrocha
DRE_01381
I
0.000
EPUS_04989
Endocarpon pusillum
EPUS_04989
I
0.000
EBI_27500
Enterocytozoon bieneusi
EBI_27500
I
0.000
Ecym_5396
Eremothecium cymbalariae
Ecym_5396
I
0.000
A1O9_06637
Exophiala aquamarina
A1O9_06637
I
0.000
HMPREF1120_02814
Exophiala dermatitidis
HMPREF1120_02814
I
0.000
PV10_08910
Exophiala mesophila
PV10_08910
I
0.000
PV06_03424
Exophiala oligosperma
PV06_03424
I
0.000
PV11_07398
Exophiala sideris
PV11_07398
I
0.000
PV08_05339
Exophiala spinifera
PV08_05339
I
0.000
PV05_11650
Exophiala xenobiotica
PV05_11650
I
0.000
Z517_08036
Fonsecaea pedrosoi
Z517_08036
I
0.000
ENSGMOG00000004406
Gadus morhua
ENSGMOG00000004406
I
0.000
foxj2
Gasterosteus aculeatus
ENSGACG00000010572
I
0.000
Hsal_11379--XP_623740.2_APIME
Harpegnathos saltator
Hsal_11379--XP_623740.2_APIME
I
0.000
HelroG89836
Helobdella robusta
HelroG89836
I
0.000
HCBG_07375
Histoplasma capsulatum
HCBG_07375
I
0.000
KAFR_0J00890
Kazachstania africana
KAFR_0J00890
I
0.000
KAFR_0J01720
Kazachstania africana
KAFR_0J01720
I
0.000
KNAG_0M01920
Kazachstania naganishii
KNAG_0M01920
I
0.000
KLLA0_F04631g
Kluyveromyces lactis
KLLA0_F04631g
I
0.000
KLTH0G09086g
Kluyveromyces thermotolerans
KLTH0G09086g
I
0.000
Kwal_4740
Kluyveromyces waltii
Kwal_4740
I
0.000
PAS_chr4_0205
Komagataella pastoris
PAS_chr4_0205
I
0.000
KUCA_T00002120001
Kuraishia capsulata
KUCA_T00002120001
I
0.000
SAKL0E09020g
Lachancea kluyveri
SAKL0E09020g
I
0.000
LALA0_S04e08592g
Lachancea lanzarotensis
LALA0_S04e08592g
I
0.000
KLTH0G09086g
Lachancea thermotolerans
KLTH0G09086g
I
0.000
ENSLACG00000001429
Latimeria chalumnae
ENSLACG00000001429
I
0.000
ENSLACG00000015173
Latimeria chalumnae
ENSLACG00000015173
I
0.000
ENSLOCG00000009392
Lepisosteus oculatus
ENSLOCG00000009392
I
0.000
LDEC009844
Leptinotarsa decemlineata
LDEC009844
I
0.000
LELG_02201
Lodderomyces elongisporus
LELG_02201
I
0.000
MPH_05348
Macrophomina phaseolina
MPH_05348
I
0.000
PGUG_02044
Meyerozyma guilliermondii
PGUG_02044
I
0.000
MCYG_01013
Microsporum canis
MCYG_01013
I
0.000
MGYG_00973
Microsporum gypseum
MGYG_00973
I
0.000
GNLVRS01_PISO0E05328g
Millerozyma farinosa
GNLVRS01_PISO0E05328g
I
0.000
GNLVRS01_PISO0F06649g
Millerozyma farinosa
GNLVRS01_PISO0F06649g
I
0.000
ML23712a
Mnemiopsis leidyi
ML23712a
I
0.000
e_gw1.4.1134.1
Mucor circinelloides
e_gw1.4.1134.1
I
0.000
MYCTH_2304475
Myceliophthora thermophila
MYCTH_2304475
I
0.000
NV14169
Nasonia vitripennis
NV14169
I
0.000
NCAS_0B06560
Naumovozyma castellii
NCAS_0B06560
I
0.000
NCAS_0G02930
Naumovozyma castellii
NCAS_0G02930
I
0.000
NDAI_0F02370
Naumovozyma dairenensis
NDAI_0F02370
I
0.000
NEPG_01226
Nematocida parisii ertm1
NEPG_01226
I
0.000
NERG_01460
Nematocida sp
NERG_01460
I
0.000
UCRNP2_293
Neofusicoccum parvum
UCRNP2_293
I
0.000
NFIA_065340
Neosartorya fischeri
CADNFIAG00005675
I
0.000
NBO_28g0037
Nosema bombycis
NBO_28g0037
I
0.000
NBO_28g0053
Nosema bombycis
NBO_28g0053
I
0.000
Ocbimv22014751m.g
Octopus bimaculoides
Ocbimv22014751m.g
I
0.000
HPODL_02534
Ogataea parapolymorpha
HPODL_02534
I
0.000
ENSONIG00000012813
Oreochromis niloticus
ENSONIG00000012813
I
0.000
ENSORLG00000011631
Oryzias latipes
ENSORLG00000011631
I
0.000
PABG_02533
Paracoccidioides brasiliensis
PABG_02533
I
0.000
PAAG_07203
Paracoccidioides sp lutzii
PAAG_07203
I
0.000
ENSPSIG00000009024
Pelodiscus sinensis
ENSPSIG00000009024
I
0.000
Pc18g00430
Penicillium chrysogenum
Pc18g00430
I
0.000
PDIP_75040
Penicillium digitatum
PDIP_75040
I
0.000
PEX1_059580
Penicillium expansum
PEX1_059580
I
0.000
PITC_013300
Penicillium italicum
PITC_013300
I
0.000
PMAA_023910
Penicillium marneffei
PMAA_023910
I
0.000
PCH_Pc18g00430
Penicillium rubens
PCH_Pc18g00430
I
0.000
U727_00433931341
Penicillium solitum
U727_00433931341
I
0.000
estExt_fgeneshPB_pg.C_490005
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_490005
I
0.000
JL09_g1492
Pichia kudriavzevii
JL09_g1492
I
0.000
XP_002493610.1
Pichia pastoris
XP_002493610.1
I
0.000
estExt_gwp_genewisePlus_worm.C_chr_2.12159
Pichia stipitis
estExt_gwp_genewisePlus_worm.C_chr_2.12159
I
0.000
PredSwiss_CON2884.2
Pneumocystis carinii
PredSwiss_CON2884.2
I
0.000
PNEG_01242
Pneumocystis murina
PNEG_01242
I
0.000
ENSPFOG00000011037
Poecilia formosa
ENSPFOG00000011037
I
0.000
Z518_04151
Rhinocladiella mackenziei
Z518_04151
I
0.000
GLOINDRAFT_82873
Rhizophagus irregularis
GLOINDRAFT_82873
I
0.000
RPRC000133
Rhodnius prolixus
RPRC000133
I
0.000
SU7_2990
Saccharomyces arboricola
SU7_2990
I
0.000
11859_YIL131C
Saccharomyces bayanus
11859_YIL131C
I
0.000
20881_Multiple
Saccharomyces bayanus
20881_Multiple
I
0.000
Scas_Contig662.9
Saccharomyces castellii
Scas_Contig662.9
I
0.000
Scas_Contig694.13
Saccharomyces castellii
Scas_Contig694.13
I
0.000
FKH1
Saccharomyces cerevisiae
YIL131C
D
0.000
10455_YIL131C
Saccharomyces mikatae
10455_YIL131C
I
0.000
18607_YNL068C
Saccharomyces mikatae
18607_YNL068C
I
0.000
10722_YIL131C
Saccharomyces paradoxus
10722_YIL131C
I
0.000
19078_YNL068C
Saccharomyces paradoxus
19078_YNL068C
I
0.000
PTSG_10744
Salpingoeca rosetta
PTSG_10744
I
0.000
ENSSHAG00000017137
Sarcophilus harrisii
ENSSHAG00000017137
I
0.000
PICST_82259
Scheffersomyces stipitis
PICST_82259
I
0.000
SPAPADRAFT_141274
Spathaspora passalidarum
SPAPADRAFT_141274
I
0.000
SPPG_02883
Spizellomyces punctatus
SPPG_02883
I
0.000
foxj2
Takifugu rubripes
ENSTRUG00000006168
I
0.000
PMAA_023910
Talaromyces marneffei
PMAA_023910
I
0.000
TSTA_032340
Talaromyces stipitatus
TSTA_032340
I
0.000
ENSTNIG00000001292
Tetraodon nigroviridis
ENSTNIG00000001292
I
0.000
foxj2
Tetraodon nigroviridis
ENSTNIG00000008113
I
0.000
TBLA_0E03730
Tetrapisispora blattae
TBLA_0E03730
I
0.000
TBLA_0G02620
Tetrapisispora blattae
TBLA_0G02620
I
0.000
TPHA_0C03060
Tetrapisispora phaffii
TPHA_0C03060
I
0.000
TPHA_0F01390
Tetrapisispora phaffii
TPHA_0F01390
I
0.000
TDEL_0C04470
Torulaspora delbrueckii
TDEL_0C04470
I
0.000
TC005482
Tribolium castaneum
TC005482
I
0.000
TEQG_01043
Trichophyton equinum
TEQG_01043
I
0.000
H101_06966
Trichophyton interdigitale
H101_06966
I
0.000
H102_08252
Trichophyton rubrum
H102_08252
I
0.000
H105_08280
Trichophyton soudanense
H105_08280
I
0.000
TESG_04573
Trichophyton tonsurans
TESG_04573
I
0.000
TRV_05777
Trichophyton verrucosum
TRV_05777
I
0.000
UREG_07540
Uncinocarpus reesii
UREG_07540
I
0.000
Kpol_1003p6
Vanderwaltozyma polyspora
Kpol_1003p6
I
0.000
Kpol_1039p10
Vanderwaltozyma polyspora
Kpol_1039p10
I
0.000
VICG_01255
Vittaforma corneae
VICG_01255
I
0.000
BN7_2053
Wickerhamomyces ciferrii
BN7_2053
I
0.000
CAD31849
Xenopus laevis
CAD31849
I
0.000
foxi4.1.L
Xenopus laevis
XB-GENE-5996119
I
0.000
foxi4.1
Xenopus tropicalis
XB-GENE-5996107
I
0.000
foxi2
Xenopus tropicalis
XB-GENE-982122
I
0.000
YALI0_C09185g
Yarrowia lipolytica
YALI0_C09185g
I
0.000
ZYRO0A01254g
Zygosaccharomyces rouxii
ZYRO0A01254g
I
0.000