OB01G17480 (Oryza brachyantha)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OB01G17480 T041953_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.846 0.755
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB01G17480.1 bHLH 81 129

Links

Other bHLH family TFs
Other Oryza brachyantha TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.865
Aquca_045_00168 Aquilegia coerulea Aquca_045_00168 N 0.840
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.856
Bostr.20505s0075 Boechera stricta Bostr.20505s0075 N 0.857
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.883
PK20225.1 Cannabis sativa PK20225.1 D 0.846
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.846
Cla019977 Citrullus lanatus Cla019977 I 0.855
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.846
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.846
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.855
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.867
Eucgr.K01103 Eucalyptus grandis Eucgr.K01103 N 0.860
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.903
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.846
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.874
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.855
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.903
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.884
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.846
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.844
MDP0000249969 Malus domestica MDP0000249969 I 0.855
MDP0000256492 Malus domestica MDP0000256492 N 0.882
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.874
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.876
mgf022146m Mimulus guttatus mgf022146m N 0.858
GSMUA_Achr7G10740_001 Musa acuminata GSMUA_Achr7G10740_001 I 0.840
GSMUA_Achr3G03510_001 Musa acuminata GSMUA_Achr3G03510_001 N 0.861
GSMUA_Achr2G20040_001 Musa acuminata GSMUA_Achr2G20040_001 N 0.870
GSMUA_Achr10G14370_001 Musa acuminata GSMUA_Achr10G14370_001 N 0.846
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.914
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.914
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.914
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.914
OMERI06G24090 Oryza meridionalis OMERI06G24090 I 0.847
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.914
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.914
OPUNC09G11520 Oryza punctata OPUNC09G11520 I 0.847
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.914
OS01G0218100 Oryza sativa OS01G0218100 I 0.914
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.903
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.903
PRUPE_ppa021837mg Prunus persica PRUPE_ppa021837mg N 0.882
29900.m001610 Ricinus communis 29900.m001610 I 0.852
SapurV1A.0029s0640 Salix purpurea SapurV1A.0029s0640 N 0.855
Si002517m.g Setaria italica Si002517m.g I 0.890
Solyc02g076920.2 Solanum lycopersicum Solyc02g076920.2 I 0.860
PGSC0003DMG400010208 Solanum tuberosum PGSC0003DMG400010208 I 0.860
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.903
TCM_029711 Theobroma cacao TCM_029711 I 0.874
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.903
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.876
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.903
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.903