ORGLA02G0180000 (Oryza glaberrima)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ORGLA02G0180000 T042887_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.857 0.646
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.851 0.521
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.851 0.521
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.851 0.521
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.851 0.521
e_gw1.209.40.1
M01756_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8070 		0.846 0.896
LRL2
M06738_2.00 		Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH69_col_a 		0.846 0.854
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA02G0180000.1 bHLH 323 370

Links

Other bHLH family TFs
Other Oryza glaberrima TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000011947 Ailuropoda melanoleuca ENSAMEG00000011947 I
Alligator_sinensis_CCG001816.1 Alligator sinensis Alligator_sinensis_CCG001816.1 I
Alligator_sinensis_CCG003243.1 Alligator sinensis Alligator_sinensis_CCG003243.1 I
Afo_R001188 Aptenodytes forsteri Afo_R001188 I
ENSAMXG00000011038 Astyanax mexicanus ENSAMXG00000011038 I
ENSAMXG00000012038 Astyanax mexicanus ENSAMXG00000012038 I
ENSP00000271889-D1 Bos grunniens ENSP00000271889-D1 I
CREB3L4 Bos taurus ENSBTAG00000014692 I
Brh_R004937 Buceros rhinoceros Brh_R004937 I
CREB3L4 Callithrix jacchus ENSCJAG00000009978 I
CREB3L4 Canis familiaris ENSCAFG00000017395 I
ENSCPOG00000012896 Cavia porcellus ENSCPOG00000012896 I
Cmyd_10005057 Chelonia mydas Cmyd_10005057 I
Cmyd_10002091 Chelonia mydas Cmyd_10002091 I
ENSCSAG00000001896 Chlorocebus sabaeus ENSCSAG00000001896 I
CREB3L4 Choloepus hoffmanni ENSCHOG00000002522 I
creb3l3b Danio rerio ENSDARG00000090903 I
creb3l3a Danio rerio ENSDARG00000056226 I
CREB3L4 Dasypus novemcinctus ENSDNOG00000042769 I
Creb3l4 Dipodomys ordii ENSDORG00000011769 I
CREB3L4 Echinops telfairi ENSETEG00000008252 I
CREB3L4 Equus caballus ENSECAG00000017552 I
CREB3L4 Felis catus ENSFCAG00000012586 I
ENSFALG00000000900 Ficedula albicollis ENSFALG00000000900 I
ENSGALG00000002523 Gallus gallus ENSGALG00000002523 I
CREB3L4 Gorilla gorilla ENSGGOG00000005601 I
CREB3L4 Homo sapiens ENSG00000143578 D
ENSSTOG00000014516 Ictidomys tridecemlineatus ENSSTOG00000014516 I
ISCW001814 Ixodes scapularis ISCW001814 I
ENSLACG00000009185 Latimeria chalumnae ENSLACG00000009185 I
ENSLOCG00000008658 Lepisosteus oculatus ENSLOCG00000008658 I
ENSLOCG00000006221 Lepisosteus oculatus ENSLOCG00000006221 I
ENSP00000271889 Macaca fascicularis ENSP00000271889 I
CREB3L4 Macaca mulatta ENSMMUG00000005008 I
ENSMEUG00000013573 Macropus eugenii ENSMEUG00000013573 I
CREB3L4 Microcebus murinus ENSMICG00000010316 I
CREB3L4 Monodelphis domestica ENSMODG00000017299 I
CREB3L3 Monodelphis domestica ENSMODG00000000817 I
ENSMPUG00000007975 Mustela putorius furo ENSMPUG00000007975 I
Myotis_brandtii_CREB3L4_10031903 Myotis brandtii Myotis_brandtii_CREB3L4_10031903 I
Myotis_brandtii_CREB3L3_10016301 Myotis brandtii Myotis_brandtii_CREB3L3_10016301 I
CREB3L3 Myotis lucifugus ENSMLUG00000008703 I
NEMVEDRAFT_v1g243817 Nematostella vectensis NEMVEDRAFT_v1g243817 I
ENSNLEG00000010798 Nomascus leucogenys ENSNLEG00000010798 I
CREB3L4 Ochotona princeps ENSOPRG00000003982 I
Ogr06733 Ophisaurus gracilis Ogr06733 I
CREB3L4 Oryctolagus cuniculus ENSOCUG00000011784 I
creb3l3a Oryzias latipes ENSORLG00000004610 I
ENSOARG00000001743 Ovis aries ENSOARG00000001743 I
CREB3L4 Pan troglodytes ENSPTRG00000001368 I
ENSPANG00000006363 Papio anubis ENSPANG00000006363 I
ENSPFOG00000002309 Poecilia formosa ENSPFOG00000002309 I
Pvit_02332 Pogona vitticeps Pvit_02332 I
Pvit_09828 Pogona vitticeps Pvit_09828 I
ENSPPYG00000000792 Pongo abelii ENSPPYG00000000792 I
CREB3L4 Procavia capensis ENSPCAG00000003143 I
CREB3L4 Pteropus vampyrus ENSPVAG00000011092 I
ENSSHAG00000011761 Sarcophilus harrisii ENSSHAG00000011761 I
ENSSARG00000011575 Sorex araneus ENSSARG00000011575 I
CREB3L4 Sus scrofa ENSSSCG00000006560 I
CREB3L4 Takifugu rubripes ENSTRUG00000011094 I
creb3l4 Xenopus tropicalis XB-GENE-5761389 I
ENSXMAG00000001292 Xiphophorus maculatus ENSXMAG00000001292 I