CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RPRC002110
(
Rhodnius prolixus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
RPRC002110
T044263_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Clk
M05972_2.00
Drosophila melanogaster
MCACGTGV
BCACGTGK
B1H
Zhu et al.(2011)
Clk_cyc_SANGER_5_FBgn0023076
0.880
0.740
Clk
M05973_2.00
Drosophila melanogaster
CACGTGSY
RSCACGTG
B1H
Zhu et al.(2011)
gce_Clk_SANGER_5_FBgn0023076
0.880
0.740
Clk
M05974_2.00
Drosophila melanogaster
CACGTGKM
KACACGTG
B1H
Zhu et al.(2011)
Met_Clk_SANGER_5_FBgn0023076
0.880
0.740
Clk
M05975_2.00
Drosophila melanogaster
SACACGTGY
RCACGTGTS
B1H
Zhu et al.(2011)
tai_Clk_SANGER_5_FBgn0023076
0.880
0.740
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RPRC002110-PA
bHLH
12
61
KRKTRNLSEKKRRDQFNLLINELGSMVSTNNRKMDKSTVLKSAISYLKNH
Links
Other
bHLH
family TFs
Other
Rhodnius prolixus
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK03938.1
Cannabis sativa
PK03938.1
N
evm.TU.supercontig_55.163
Carica papaya
evm.TU.supercontig_55.163
N
GLYMA17G20175
Glycine max
GLYMA17G20175
N
Lus10035416.g
Linum usitatissimum
Lus10035416.g
N
cassava2445.valid.m1
Manihot esculenta
cassava2445.valid.m1
N
POPTR_0005s18090
Populus trichocarpa
POPTR_0005s18090
N
POPTR_0007s11170
Populus trichocarpa
POPTR_0007s11170
N
30115.m001183
Ricinus communis
30115.m001183
N
SapurV1A.0711s0090
Salix purpurea
SapurV1A.0711s0090
N
SapurV1A.0815s0020
Salix purpurea
SapurV1A.0815s0020
N