CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_5AL_F72B730FE
(
Triticum aestivum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Traes_5AL_F72B730FE
T045720_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC
GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.851
0.808
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN
NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.838
0.769
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.838
0.769
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5AL_F72B730FE.2
bHLH
113
164
ATDSHSLSERVRRERISERMRMLQSLVPGCDKVVTGKALILDEIINYVQSLQ
Links
Other
bHLH
family TFs
Other
Triticum aestivum
TFs
300 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action