Cmyd_10011837 (Chelonia mydas)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cmyd_10011837 T047090_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Npas2
M01731_2.00 		Mus musculus
NVCACGTGBN
NVCACGTGBN		 PBM
Weirauch et al.(2014)
pTH5457 		0.882 0.979
NPAS2
M04158_2.00 		Homo sapiens
NRCACGTGKH
DMCACGTGYN		 SELEX
Yin et al.(2017)
NPAS2_eDBD_HT-SELEX 		0.882 0.979
Npas2
M09468_2.00 		Mus musculus
VKCACRTGKM
KMCAYGTGMB		 Misc
Heinz et al.(2010)
Liver-NPAS2_GSE39860 		0.882 0.979
NPAS2
M04159_2.00 		Homo sapiens
DVCRCRTGKH
DMCAYGYGBH		 SELEX
Yin et al.(2017)
NPAS2_eDBD_Methyl-HT-SELEX 		0.882 0.979
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10011837 bHLH 25 72

Links

Other bHLH family TFs
Other Chelonia mydas TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_150877 Agaricus bisporus AGABI2DRAFT_150877 N
BOTBODRAFT_99872 Botryobasidium botryosum BOTBODRAFT_99872 N
CERSUDRAFT_119121 Ceriporiopsis subvermispora CERSUDRAFT_119121 N
CC1G_09335 Coprinopsis cinerea CC1G_09335 N
DACRYDRAFT_114563 Dacryopinax sp DACRYDRAFT_114563 N
GALMADRAFT_97916 Galerina marginata GALMADRAFT_97916 N
GLOTRDRAFT_120398 Gloeophyllum trabeum GLOTRDRAFT_120398 N
M413DRAFT_446301 Hebeloma cylindrosporum M413DRAFT_446301 N
estExt_fgenesh2_pm.C_30290 Heterobasidion annosum estExt_fgenesh2_pm.C_30290 N
HETIRDRAFT_476261 Heterobasidion irregulare HETIRDRAFT_476261 N
JAAARDRAFT_35324 Jaapia argillacea JAAARDRAFT_35324 N
K443DRAFT_662219 Laccaria amethystina K443DRAFT_662219 N
LACBIDRAFT_313642 Laccaria bicolor LACBIDRAFT_313642 N
Moror_6251 Moniliophthora roreri Moror_6251 N
PAXRUDRAFT_825716 Paxillus rubicundulus PAXRUDRAFT_825716 N
PHACADRAFT_174788 Phanerochaete carnosa PHACADRAFT_174788 N
PHLGIDRAFT_99458 Phlebiopsis gigantea PHLGIDRAFT_99458 N
PILCRDRAFT_824046 Piloderma croceum PILCRDRAFT_824046 N
PISMIDRAFT_28197 Pisolithus microcarpus PISMIDRAFT_28197 N
M404DRAFT_995995 Pisolithus tinctorius M404DRAFT_995995 N
PLEOSDRAFT_1112903 Pleurotus ostreatus PLEOSDRAFT_1112903 N
POSPLDRAFT_104953 Postia placenta POSPLDRAFT_104953 N
POSPLDRAFT_104955 Postia placenta POSPLDRAFT_104955 N
V565_091980 Rhizoctonia solani V565_091980 N
SCHCODRAFT_83015 Schizophyllum commune SCHCODRAFT_83015 N
SCLCIDRAFT_13363 Scleroderma citrinum SCLCIDRAFT_13363 N
M408DRAFT_328654 Serendipita vermifera M408DRAFT_328654 N
SERLA73DRAFT_122259 Serpula lacrymans SERLA73DRAFT_122259 N
M422DRAFT_173033 Sphaerobolus stellatus M422DRAFT_173033 N
CY34DRAFT_468895 Suillus luteus CY34DRAFT_468895 N
M407DRAFT_20239 Tulasnella calospora M407DRAFT_20239 N